Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX7
  • Mouse genes Snx7
  • Rat genes Snx7
  • Zfish genes snx7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097153	cysteine-type endopeptidase activity involved in apoptotic process	snx7	IGI	ZFIN:ZDB-GENE-030826-3,ZFIN:ZDB-MRPHLNO-120927-1	Zfish	PMID:22213104
Molecular Function	GO:0005515	protein binding	SNX7	IPI	UniProtKB:Q8IYF3	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SNX7	IPI	UniProtKB:O95219	Human	PMID:23085988
Molecular Function	GO:0005515	protein binding	SNX7	IPI	UniProtKB:O14964	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX7	IPI	UniProtKB:Q8IYF3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX7	IPI	UniProtKB:O95219	Human	PMID:32513819
Molecular Function	GO:0005515	protein binding	Snx7	IPI	UniProtKB:Q5DTT2	Mouse	MGI:MGI:5562465|PMID:24261326
Cellular Component	GO:0005769	early endosome	SNX7	IDA		Human	PMID:32513819
Biological Process	GO:0001889	liver development	snx7	IMP	ZFIN:ZDB-MRPHLNO-120927-1	Zfish	PMID:22213104
Biological Process	GO:0043066	negative regulation of apoptotic process	snx7	IMP	ZFIN:ZDB-MRPHLNO-120927-1	Zfish	PMID:22213104
Biological Process	GO:2000786	positive regulation of autophagosome assembly	SNX7	IMP		Human	PMID:32513819
Biological Process	GO:0015031	protein transport	SNX7	IMP		Human	PMID:32513819

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern