Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX9
  • Mouse genes Snx9
  • Rat genes Snx9
  • Zfish genes snx9a,snx9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005545	1-phosphatidylinositol binding	SNX9	IDA		Human	PMID:17948057
Molecular Function	GO:0071933	Arp2/3 complex binding	SNX9	IDA		Human	PMID:18388313
Molecular Function	GO:0045296	cadherin binding	SNX9	HDA		Human	PMID:25468996
Molecular Function	GO:0042802	identical protein binding	SNX9	IPI	UniProtKB:Q9Y5X1	Human	PMID:18940612
Molecular Function	GO:0042802	identical protein binding	SNX9	IPI	UniProtKB:Q9Y5X1	Human	PMID:23085988
Molecular Function	GO:0035091	phosphatidylinositol binding	SNX9	IDA		Human	PMID:18388313
Molecular Function	GO:0035091	phosphatidylinositol binding	Snx9	IDA		Mouse	PMID:12917015
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:O88839	Human	PMID:10531379
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q13443	Human	PMID:10531379
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q13444	Human	PMID:10531379
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q61072	Human	PMID:10531379
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q17R13	Human	PMID:11799118
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q07889	Human	PMID:14679214
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q07890	Human	PMID:14679214
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P50570	Human	PMID:15703209
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q13444	Human	PMID:16374509
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:B7UM88	Human	PMID:16585770
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P42768	Human	PMID:17242350
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q05193	Human	PMID:18353773
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:O00401	Human	PMID:18388313
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P50570	Human	PMID:18388313
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q6UW56	Human	PMID:18388313
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P42768	Human	PMID:19487689
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q8WV41	Human	PMID:19487689
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P48023	Human	PMID:19807924
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P00883	Human	PMID:20129922
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q96RF0	Human	PMID:20427313
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P0CG48	Human	PMID:20491914
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q96J02	Human	PMID:20491914
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q8WV41	Human	PMID:23085988
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q01968	Human	PMID:25107275
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q98143	Human	PMID:25544563
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:Q13444	Human	PMID:25825872
Molecular Function	GO:0005515	protein binding	SNX9	IPI	UniProtKB:P50570	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	Snx9	IPI	UniProtKB:Q01968	Mouse	MGI:MGI:6094416|PMID:25107275
Molecular Function	GO:0005515	protein binding	Snx9	IPI	PR:Q60751	Mouse	PMID:12917015
Molecular Function	GO:0005515	protein binding	Snx9	IPI	PR:P15208	Mouse	PMID:12917015
Molecular Function	GO:0042803	protein homodimerization activity	SNX9	IPI	UniProtKB:Q9Y5X1	Human	PMID:17948057
Molecular Function	GO:0031625	ubiquitin protein ligase binding	SNX9	IPI	UniProtKB:Q96J02	Human	PMID:20491914
Cellular Component	GO:0005905	clathrin-coated pit	SNX9	IDA		Human	PMID:15703209
Cellular Component	GO:0030136	clathrin-coated vesicle	SNX9	IDA		Human	PMID:15703209
Cellular Component	GO:0032437	cuticular plate	Snx9	IDA		Mouse	MGI:MGI:6233193|PMID:23437151
Cellular Component	GO:0005737	cytoplasm	SNX9	IDA		Human	PMID:18388313
Cellular Component	GO:0005737	cytoplasm	Snx9	IDA		Mouse	PMID:12917015
Cellular Component	GO:0031410	cytoplasmic vesicle	SNX9	IDA		Human	PMID:15703209
Cellular Component	GO:0031410	cytoplasmic vesicle	SNX9	IDA		Human	PMID:22718350
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	SNX9	IDA		Human	PMID:17948057
Cellular Component	GO:0005829	cytosol	SNX9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	SNX9	HDA		Human	PMID:19056867
Cellular Component	GO:0005886	plasma membrane	SNX9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SNX9	IDA		Human	PMID:18388313
Cellular Component	GO:0005886	plasma membrane	Snx9	IDA		Mouse	PMID:12917015
Cellular Component	GO:0098793	presynapse	Snx9	IDA		Rat	PMID:17681954|RGD:155230781
Cellular Component	GO:0005802	trans-Golgi network	SNX9	IDA		Human	PMID:15703209
Biological Process	GO:0036089	cleavage furrow formation	SNX9	IMP		Human	PMID:22718350
Biological Process	GO:0006897	endocytosis	SNX9	IMP		Human	PMID:22718350
Biological Process	GO:0016197	endosomal transport	SNX9	IMP		Human	PMID:22718350
Biological Process	GO:0006886	intracellular protein transport	SNX9	IMP		Human	PMID:15703209
Biological Process	GO:0006886	intracellular protein transport	Snx9	IMP		Mouse	PMID:12917015
Biological Process	GO:0060988	lipid tube assembly	SNX9	IDA		Human	PMID:17948057
Biological Process	GO:0000281	mitotic cytokinesis	SNX9	IMP		Human	PMID:22718350
Biological Process	GO:0097320	plasma membrane tubulation	SNX9	IDA		Human	PMID:18388313
Biological Process	GO:0030838	positive regulation of actin filament polymerization	Snx9	IDA		Mouse	MGI:MGI:6233193|PMID:23437151
Biological Process	GO:0043547	positive regulation of GTPase activity	SNX9	IDA		Human	PMID:15703209
Biological Process	GO:0051044	positive regulation of membrane protein ectodomain proteolysis	SNX9	IDA		Human	PMID:18353773
Biological Process	GO:0045860	positive regulation of protein kinase activity	SNX9	IDA		Human	PMID:18388313
Biological Process	GO:0065003	protein-containing complex assembly	SNX9	IDA		Human	PMID:15703209
Biological Process	GO:0006898	receptor-mediated endocytosis	SNX9	IMP		Human	PMID:15703209
Biological Process	GO:1900242	regulation of synaptic vesicle endocytosis	Snx9	IDA		Rat	PMID:17681954|RGD:155230781
Biological Process	GO:1900242	regulation of synaptic vesicle endocytosis	Snx9	IMP		Rat	PMID:17681954|RGD:155230781

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern