Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SOBP
  • Mouse genes Sobp
  • Rat genes Sobp
  • Zfish genes sobpa,sobpb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sobp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0032184	SUMO polymer binding	Sobp	IDA		Mouse	MGI:MGI:5490849|PMID:23086935
Cellular Component	GO:0005634	nucleus	Sobp	IDA		Mouse	MGI:MGI:3801556|PMID:18579736
Biological Process	GO:0090102	cochlea development	Sobp	IMP		Mouse	MGI:MGI:3801556|PMID:18579736
Biological Process	GO:0050890	cognition	SOBP	IMP		Human	PMID:21035105
Biological Process	GO:0042472	inner ear morphogenesis	Sobp	IMP	MGI:MGI:1856614	Mouse	PMID:16962269
Biological Process	GO:0007626	locomotory behavior	Sobp	IMP	MGI:MGI:1856614	Mouse	PMID:16962269
Biological Process	GO:0007605	sensory perception of sound	Sobp	IMP	MGI:MGI:3055292	Mouse	PMID:16962269
Biological Process	GO:0007605	sensory perception of sound	Sobp	IMP	MGI:MGI:1856614	Mouse	PMID:16962269

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern