Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SOD3
  • Mouse genes Sod3
  • Rat genes Sod3
  • Zfish genes sod3a,sod3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sod3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008201	heparin binding	sod3b	IDA		Zfish	PMID:33476796
Molecular Function	GO:0060090	molecular adaptor activity	SOD3	EXP		Human	PMID:19289127
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q9UBX5	Human	PMID:15528465
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q04656	Human	PMID:16371425
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q12797-6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q9NZI2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q9UMX0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SOD3	IPI	UniProtKB:Q9Y2W7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sod3	IPI	PR:Q64430	Mouse	PMID:16371425
Molecular Function	GO:0004784	superoxide dismutase activity	Sod3	IDA		Mouse	PMID:16371425
Molecular Function	GO:0004784	superoxide dismutase activity	Sod3	IDA		Rat	PMID:8643556|RGD:730025
Molecular Function	GO:0004784	superoxide dismutase activity	sod3a	IDA		Zfish	PMID:33476796
Molecular Function	GO:0004784	superoxide dismutase activity	sod3b	IDA		Zfish	PMID:33476796
Cellular Component	GO:0062023	collagen-containing extracellular matrix	SOD3	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	SOD3	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	SOD3	IDA		Human	PMID:9699963
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Sod3	IDA		Mouse	MGI:MGI:3610795|PMID:15528465
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Sod3	IDA		Rat	PMID:16372329|RGD:1581086
Cellular Component	GO:0005737	cytoplasm	Sod3	IDA		Rat	PMID:16372329|RGD:1581086
Cellular Component	GO:0070062	extracellular exosome	SOD3	HDA		Human	PMID:23533145
Cellular Component	GO:0005576	extracellular region	SOD3	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	SOD3	HDA		Human	PMID:20551380
Cellular Component	GO:0005615	extracellular space	Sod3	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Sod3	IDA		Mouse	PMID:15016652
Cellular Component	GO:0005615	extracellular space	Sod3	IDA		Rat	PMID:8643556|RGD:730025
Cellular Component	GO:0005634	nucleus	Sod3	IDA		Rat	PMID:16372329|RGD:1581086
Biological Process	GO:0097746	blood vessel diameter maintenance	Sod3	IMP		Rat	PMID:24322611|RGD:38548929
Biological Process	GO:0046688	response to copper ion	Sod3	IMP		Rat	PMID:16081273|RGD:1581097
Biological Process	GO:0001666	response to hypoxia	Sod3	IMP	MGI:MGI:2652386	Mouse	PMID:15016652
Biological Process	GO:0006979	response to oxidative stress	Sod3	IEP		Rat	PMID:15485085|RGD:1581091

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern