Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SP6
  • Mouse genes Sp6
  • Rat genes Sp6
  • Zfish genes sp6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sp6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:Q96EH3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P17612	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P27797	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P36957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P37173	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:P49810	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SP6	IPI	UniProtKB:Q8TDX7	Human	PMID:32814053
Cellular Component	GO:0005829	cytosol	Sp6	IDA		Rat	PMID:22676574|RGD:10047189
Cellular Component	GO:0005634	nucleus	Sp6	IDA		Rat	PMID:22676574|RGD:10047189
Biological Process	GO:0001837	epithelial to mesenchymal transition	Sp6	IMP		Mouse	MGI:MGI:6305509|PMID:30504223
Biological Process	GO:0042476	odontogenesis	Sp6	IMP		Mouse	MGI:MGI:6305509|PMID:30504223
Biological Process	GO:0042481	regulation of odontogenesis	Sp6	IMP	MGI:MGI:3775913	Mouse	PMID:18156176

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern