Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPATA18
  • Mouse genes Spata18
  • Rat genes Spata18
  • Zfish genes spata18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spata18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SPATA18	IPI	UniProtKB:Q8TC71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:O60238	Human	PMID:21264221
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q12983	Human	PMID:22292033
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:O95995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:P49639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q13155	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q4G0R1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q5JST6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q5T3J3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q68D86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q96PF1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q9BWT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q9Y6A5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPATA18	IPI	UniProtKB:Q9Y6D9	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	SPATA18	IDA		Human	PMID:21264221
Cellular Component	GO:0005737	cytoplasm	SPATA18	IDA		Human	PMID:21264228
Cellular Component	GO:0005737	cytoplasm	Spata18	IDA		Rat	PMID:15236321|RGD:1302843
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SPATA18	IDA		Human	PMID:21264228
Cellular Component	GO:0005741	mitochondrial outer membrane	SPATA18	IDA		Human	PMID:21264221
Cellular Component	GO:0005741	mitochondrial outer membrane	SPATA18	IDA		Human	PMID:21264228
Cellular Component	GO:0005739	mitochondrion	SPATA18	IDA		Human	GO_REF:0000052
Cellular Component	GO:0036126	sperm flagellum	Spata18	IDA		Rat	PMID:21546614|RGD:7394743
Biological Process	GO:0006974	DNA damage response	SPATA18	IDA		Human	PMID:21264221
Biological Process	GO:0035694	mitochondrial protein catabolic process	SPATA18	IMP		Human	PMID:21264221
Biological Process	GO:0035694	mitochondrial protein catabolic process	SPATA18	IMP		Human	PMID:21264228
Biological Process	GO:0035695	mitophagy by induced vacuole formation	SPATA18	IMP		Human	PMID:21264228
Biological Process	GO:0048545	response to steroid hormone	spata18	IEP		Zfish	PMID:28265462

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern