Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPDYE1,SPDYE11,SPDYE13,SPDYE14,SPDYE21,SPDYE4,SPDYE5,SPDYE7P,SPDYE8,SPDYE9
  • Mouse genes Spdye4a
  • Rat genes Spdye4
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spdye4a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030548	acetylcholine receptor regulator activity	SPDYE11	IDA		Human	PMID:27789755
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:O75604	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:P35557	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:P47897	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:P61024	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q00526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q00535	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q92917	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q96A72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q9NVG8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q9Y3C6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:O60885	Human	PMID:35016035
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:P61024	Human	PMID:35016035
Molecular Function	GO:0005515	protein binding	SPDYE4	IPI	UniProtKB:Q00535	Human	PMID:35016035
Molecular Function	GO:0019901	protein kinase binding	Spdye4a	IPI	UniProtKB:P24033|UniProtKB:P35567	Mouse	MGI:MGI:3617485|PMID:15611625
Biological Process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity	Spdye4a	IDA		Mouse	MGI:MGI:3617485|PMID:15611625

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern