Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPEG
  • Mouse genes Speg
  • Rat genes Speg
  • Zfish genes spega,spegb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Speg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SPEG	IPI	UniProtKB:Q99873	Human	PMID:25416956
Cellular Component	GO:0005634	nucleus	Speg	IDA		Rat	PMID:8663449|RGD:634650
Biological Process	GO:0055013	cardiac muscle cell development	Speg	IMP	MGI:MGI:4830540	Mouse	PMID:19118250
Biological Process	GO:0072359	circulatory system development	Speg	IMP	MGI:MGI:4830540	Mouse	PMID:19118250
Biological Process	GO:0001701	in utero embryonic development	Speg	IMP	MGI:MGI:4830540	Mouse	PMID:19118250
Biological Process	GO:0042692	muscle cell differentiation	Speg	IEP		Rat	PMID:8663449|RGD:634650
Biological Process	GO:0060541	respiratory system development	Speg	IMP	MGI:MGI:4830540	Mouse	PMID:19118250

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern