Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPTY2D1
  • Mouse genes Spty2d1
  • Rat genes Spty2d1
  • Zfish genes spty2d1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spty2d1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	SPTY2D1	IDA		Human	PMID:23378026
Molecular Function	GO:0042393	histone binding	SPTY2D1	IDA		Human	PMID:23378026
Molecular Function	GO:0140713	histone chaperone activity	SPTY2D1	IMP		Human	PMID:26109053
Cellular Component	GO:0005730	nucleolus	SPTY2D1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SPTY2D1	IDA		Human	GO_REF:0000052
Biological Process	GO:0031507	heterochromatin formation	SPTY2D1	IMP		Human	PMID:26109053
Biological Process	GO:0006334	nucleosome assembly	SPTY2D1	IMP		Human	PMID:23378026
Biological Process	GO:0006355	regulation of DNA-templated transcription	SPTY2D1	IMP		Human	PMID:26109053

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern