Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPZ1
  • Mouse genes Spz1
  • Rat genes Spz1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spz1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Spz1	IDA		Mouse	PMID:30541061
Molecular Function	GO:0070888	E-box binding	Spz1	IDA		Mouse	PMID:30541061
Molecular Function	GO:0005515	protein binding	SPZ1	IPI	UniProtKB:O60941	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SPZ1	IPI	UniProtKB:O95714	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SPZ1	IPI	UniProtKB:O60941	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SPZ1	IPI	UniProtKB:O60941-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SPZ1	IPI	UniProtKB:O95714	Human	PMID:35140242
Cellular Component	GO:0005634	nucleus	Spz1	IDA		Mouse	PMID:11165476
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Spz1	IDA		Mouse	PMID:30541061

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern