Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SREK1
  • Mouse genes Srek1
  • Rat genes Srek1
  • Zfish genes srek1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Srek1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:P78362	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q96SB4	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q05519	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:A0A0C4DG62	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:O75400-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:P40222	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q05519-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q14498	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q96D09	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:P78362	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	SREK1	IPI	UniProtKB:Q96SB4	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Srek1	IPI	UniProtKB:P38159	Rat	PMID:14559993|RGD:8554506
Molecular Function	GO:0005515	protein binding	Srek1	IPI	UniProtKB:P84103	Rat	PMID:14559993|RGD:8554506
Molecular Function	GO:0005515	protein binding	Srek1	IPI	UniProtKB:Q15424	Rat	PMID:14559993|RGD:8554506
Molecular Function	GO:0005515	protein binding	Srek1	IPI	UniProtKB:Q16629	Rat	PMID:14559993|RGD:8554506
Molecular Function	GO:0005515	protein binding	Srek1	IPI	UniProtKB:Q92841	Rat	PMID:14559993|RGD:8554506
Molecular Function	GO:0003723	RNA binding	SREK1	HDA		Human	PMID:22681889
Cellular Component	GO:0016607	nuclear speck	SREK1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SREK1	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern