Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SS18L1
  • Mouse genes Ss18l1
  • Rat genes Ss18l1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ss18l1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q15427	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q92567	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:P14678-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:P17931	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:P33240	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q15427	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q5TAL4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q6NVH9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q8NDC0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q92567	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:Q96PC5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SS18L1	IPI	UniProtKB:A0A0S2Z4Q4	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	Ss18l1	IPI	UniProtKB:Q09472	Rat	PMID:14716005|RGD:1304284
Molecular Function	GO:0005515	protein binding	Ss18l1	IPI	UniProtKB:Q92793	Rat	PMID:14716005|RGD:1304284
Molecular Function	GO:0005515	protein binding	Ss18l1	IPI	UniProtKB:Q8K1P7	Rat	PMID:19081374|RGD:8554007
Cellular Component	GO:0000779	condensed chromosome, centromeric region	Ss18l1	IDA		Mouse	PMID:18316482
Cellular Component	GO:0000779	condensed chromosome, centromeric region	Ss18l1	IDA		Mouse	PMID:22164254
Cellular Component	GO:0000779	condensed chromosome, centromeric region	Ss18l1	IDA		Mouse	PMID:24891606
Cellular Component	GO:0000779	condensed chromosome, centromeric region	Ss18l1	IDA		Mouse	PMID:18283110
Cellular Component	GO:0005829	cytosol	SS18L1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	SS18L1	IDA		Human	PMID:18331714
Cellular Component	GO:0071565	nBAF complex	Ss18l1	IDA		Mouse	PMID:23785148
Cellular Component	GO:0016604	nuclear body	Ss18l1	IDA		Rat	PMID:15488321|RGD:8553579
Cellular Component	GO:0016604	nuclear body	Ss18l1	IDA		Rat	PMID:15866867|RGD:8554117
Cellular Component	GO:0005654	nucleoplasm	SS18L1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ss18l1	IDA		Rat	PMID:14716005|RGD:1304284
Cellular Component	GO:0005634	nucleus	Ss18l1	IDA		Rat	PMID:15488321|RGD:8553579
Cellular Component	GO:0005634	nucleus	Ss18l1	IDA		Rat	PMID:15866867|RGD:8554117
Biological Process	GO:0016358	dendrite development	Ss18l1	IMP	MGI:MGI:3028533	Mouse	PMID:14716005
Biological Process	GO:0050775	positive regulation of dendrite morphogenesis	Ss18l1	IMP		Mouse	PMID:23785148
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Ss18l1	IDA		Rat	PMID:14716005|RGD:1304284
Biological Process	GO:0050773	regulation of dendrite development	Ss18l1	IDA		Rat	PMID:15866867|RGD:8554117

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern