Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SSBP1
  • Mouse genes Ssbp1
  • Rat genes Ssbp1
  • Zfish genes ssbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ssbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	SSBP1	IDA		Human	PMID:18063578
Molecular Function	GO:0042802	identical protein binding	SSBP1	IPI	UniProtKB:Q04837	Human	PMID:22453275
Molecular Function	GO:0042802	identical protein binding	SSBP1	IPI	UniProtKB:Q04837	Human	PMID:31550237
Molecular Function	GO:0005515	protein binding	SSBP1	IPI	UniProtKB:Q9Y2S7	Human	PMID:16428295
Molecular Function	GO:0005515	protein binding	SSBP1	IPI	UniProtKB:P04618	Human	PMID:22190034
Molecular Function	GO:0005515	protein binding	SSBP1	IPI	UniProtKB:O75603	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP1	IPI	UniProtKB:P47929	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP1	IPI	UniProtKB:Q7L8S5	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	SSBP1	IDA		Human	PMID:31550237
Molecular Function	GO:0003723	RNA binding	SSBP1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SSBP1	HDA		Human	PMID:22681889
Molecular Function	GO:0003697	single-stranded DNA binding	SSBP1	IMP		Human	PMID:21953457
Molecular Function	GO:0003697	single-stranded DNA binding	SSBP1	IDA		Human	PMID:26446790
Molecular Function	GO:0003697	single-stranded DNA binding	SSBP1	IDA		Human	PMID:31550240
Cellular Component	GO:0070062	extracellular exosome	SSBP1	HDA		Human	PMID:20458337
Cellular Component	GO:0042645	mitochondrial nucleoid	SSBP1	IDA		Human	PMID:18063578
Cellular Component	GO:0042645	mitochondrial nucleoid	SSBP1	IDA		Human	PMID:31550240
Cellular Component	GO:0005739	mitochondrion	SSBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	SSBP1	IDA		Human	PMID:31550237
Cellular Component	GO:0005739	mitochondrion	SSBP1	IDA		Human	PMID:31550240
Cellular Component	GO:0005739	mitochondrion	Ssbp1	IDA		Mouse	PMID:16860483
Cellular Component	GO:0005739	mitochondrion	Ssbp1	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005634	nucleus	SSBP1	HDA		Human	PMID:21630459
Biological Process	GO:0006268	DNA unwinding involved in DNA replication	SSBP1	IDA		Human	PMID:26446790
Biological Process	GO:0070584	mitochondrion morphogenesis	Ssbp1	IMP		Mouse	PMID:16860483
Biological Process	GO:1905776	positive regulation of DNA helicase activity	SSBP1	IDA		Human	PMID:15167897
Biological Process	GO:0051096	positive regulation of helicase activity	SSBP1	IDA		Human	PMID:12975372
Biological Process	GO:0090297	positive regulation of mitochondrial DNA replication	SSBP1	IDA		Human	PMID:31550240
Biological Process	GO:0051289	protein homotetramerization	SSBP1	IDA		Human	PMID:31550240

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern