Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SSBP3
  • Mouse genes Ssbp3
  • Rat genes Ssbp3
  • Zfish genes ssbp3a,ssbp3b,ssbp4,zgc:110158
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ssbp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:O43679	Human	PMID:18330356
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:O43679	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:P07947	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q01844	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q13526	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q86U70	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9NPJ8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9NUY8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9NUY8-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9UBH0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q86U70	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:O60941-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:O75177-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:P07947	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:P51451	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q86U70-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9NPJ8-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSBP3	IPI	UniProtKB:Q9UBH0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ssbp3	IPI	UniProtKB:P63006	Mouse	PMID:26494787
Molecular Function	GO:0005515	protein binding	Ssbp3	IPI	PR:P70662	Mouse	PMID:19323994
Molecular Function	GO:0005515	protein binding	Ssbp3	IPI	PR:P61969	Mouse	PMID:19323994
Molecular Function	GO:0003713	transcription coactivator activity	Ssbp3	IDA		Mouse	PMID:19323994
Cellular Component	GO:0032991	protein-containing complex	Ssbp3	IDA		Mouse	MGI:MGI:3578570|PMID:15857913
Cellular Component	GO:0005667	transcription regulator complex	Ssbp3	IDA		Mouse	PMID:26494787
Biological Process	GO:0006351	DNA-templated transcription	Ssbp3	IDA		Mouse	MGI:MGI:3840011|PMID:19323994
Biological Process	GO:0060322	head development	Ssbp3	IGI	UniProtKB:P63006|UniProtKB:P70662	Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0060323	head morphogenesis	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	Ssbp3	IMP		Mouse	PMID:24029230
Biological Process	GO:0048382	mesendoderm development	Ssbp3	IMP	MGI:MGI:5698524,MGI:MGI:2656539	Mouse	PMID:26494787
Biological Process	GO:0021547	midbrain-hindbrain boundary initiation	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0048936	peripheral nervous system neuron axonogenesis	ssbp3a	IMP	ZFIN:ZDB-MRPHLNO-110126-2	Zfish	PMID:21056553
Biological Process	GO:2000744	positive regulation of anterior head development	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0008284	positive regulation of cell population proliferation	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Ssbp3	IDA		Mouse	MGI:MGI:3840011|PMID:19323994
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ssbp3	IDA		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ssbp3	IGI	MGI:MGI:95662	Mouse	PMID:19323994
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ssbp3	IGI	MGI:MGI:894762	Mouse	PMID:19323994
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ssbp3	IGI	MGI:MGI:109360	Mouse	PMID:19323994
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ssbp3	IGI	MGI:MGI:98480	Mouse	PMID:19323994
Biological Process	GO:0021501	prechordal plate formation	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913
Biological Process	GO:0065003	protein-containing complex assembly	Ssbp3	IMP		Mouse	MGI:MGI:3578570|PMID:15857913

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern