Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SSX1,SSX3,SSX6P
  • Mouse genes Ssxb6
  • Rat genes Ssx1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ssxb6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SSX1	IPI	UniProtKB:Q9UBF1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX1	IPI	UniProtKB:Q8N3F0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX1	IPI	UniProtKB:Q96GN5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8TD10	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q96DZ9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q96MT8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9H4E5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9NPJ6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9Y2D8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8TD10	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q96MT8	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q6PJH3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8IZR5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8NA61-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8TD10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q8WWB5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q96DZ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9BRT8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9NPJ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SSX3	IPI	UniProtKB:Q9UJ41-4	Human	PMID:32296183
Molecular Function	GO:0003714	transcription corepressor activity	SSX1	IMP		Human	PMID:10072425
Cellular Component	GO:0005634	nucleus	SSX1	IDA		Human	PMID:10072425
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SSX1	IDA		Human	PMID:10072425

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern