Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ST13,ST13P4,ST13P5
  • Mouse genes St13
  • Rat genes St13
  • Zfish genes st13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set St13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0032564	dATP binding	St13	IDA		Rat	PMID:9183013|RGD:2326107
Molecular Function	GO:0030544	Hsp70 protein binding	St13	IDA		Rat	PMID:7585962|RGD:729993
Molecular Function	GO:0030544	Hsp70 protein binding	St13	IPI	RGD:621725	Rat	PMID:9528774|RGD:634185
Molecular Function	GO:0042802	identical protein binding	St13	IPI	UniProtKB:P50503	Rat	PMID:23812373|RGD:13432255
Molecular Function	GO:0042802	identical protein binding	St13	IPI	RGD:621312	Rat	PMID:7585962|RGD:729993
Molecular Function	GO:0042802	identical protein binding	St13	IPI	RGD:621312	Rat	PMID:8999928|RGD:2326110
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:P02649	Human	PMID:21163940
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:P29474	Human	PMID:21163940
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:P49768	Human	PMID:21163940
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ST13	IPI	UniProtKB:Q9NNX6-10	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	St13	IPI	UniProtKB:P06211	Rat	PMID:21808025|RGD:13432273
Molecular Function	GO:0019904	protein domain specific binding	St13	IDA		Rat	PMID:7585962|RGD:729993
Molecular Function	GO:0019904	protein domain specific binding	St13	IDA		Rat	PMID:8999928|RGD:2326110
Molecular Function	GO:0019904	protein domain specific binding	St13	IPI	RGD:621725	Rat	PMID:9528774|RGD:634185
Molecular Function	GO:0044877	protein-containing complex binding	St13	IDA		Rat	PMID:7585962|RGD:729993
Molecular Function	GO:0051087	protein-folding chaperone binding	St13	IPI	RGD:621725	Rat	PMID:9528774|RGD:634185
Molecular Function	GO:0051082	unfolded protein binding	St13	IDA		Rat	PMID:9183013|RGD:2326107
Cellular Component	GO:0005829	cytosol	ST13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	St13	IDA		Rat	PMID:7585962|RGD:729993
Cellular Component	GO:0070062	extracellular exosome	ST13	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	ST13	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	ST13P4	HDA		Human	PMID:20458337
Cellular Component	GO:0032991	protein-containing complex	St13	IDA		Rat	PMID:7585962|RGD:729993
Cellular Component	GO:0032991	protein-containing complex	St13	IDA		Rat	PMID:9528774|RGD:634185
Biological Process	GO:0051085	chaperone cofactor-dependent protein refolding	St13	IDA		Rat	PMID:7585962|RGD:729993
Biological Process	GO:0061084	negative regulation of protein refolding	St13	IDA		Rat	PMID:9183013|RGD:2326107
Biological Process	GO:0009617	response to bacterium	St13	IEP		Mouse	PMID:23012479

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern