Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STAB1
  • Mouse genes Stab1
  • Rat genes Stab1
  • Zfish genes stab1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stab1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030169	low-density lipoprotein particle binding	STAB1	IDA		Human	PMID:12077138
Molecular Function	GO:0005041	low-density lipoprotein particle receptor activity	STAB1	IDA		Human	PMID:12077138
Molecular Function	GO:0005515	protein binding	STAB1	IPI	UniProtKB:Q9BWS9	Human	PMID:16357325
Molecular Function	GO:0005515	protein binding	STAB1	IPI	UniProtKB:P02751	Human	PMID:34968453
Molecular Function	GO:0005044	scavenger receptor activity	STAB1	IDA		Human	PMID:12077138
Molecular Function	GO:0005044	scavenger receptor activity	stab1	IGI	ZFIN:ZDB-GENO-230127-12	Zfish	PMID:33838334
Molecular Function	GO:0005044	scavenger receptor activity	stab1	IMP	ZFIN:ZDB-GENO-230127-8	Zfish	PMID:33838334
Cellular Component	GO:0005886	plasma membrane	STAB1	IDA		Human	PMID:12077138
Biological Process	GO:0007267	cell-cell signaling	STAB1	IDA		Human	PMID:12077138
Biological Process	GO:0042742	defense response to bacterium	STAB1	IDA		Human	PMID:12077138
Biological Process	GO:0016525	negative regulation of angiogenesis	STAB1	IMP		Human	PMID:12077138
Biological Process	GO:1901492	positive regulation of lymphangiogenesis	stab1	IMP	ZFIN:ZDB-MRPHLNO-130424-4	Zfish	PMID:23484014
Biological Process	GO:1901492	positive regulation of lymphangiogenesis	stab1	IMP	ZFIN:ZDB-MRPHLNO-130424-5	Zfish	PMID:23484014

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern