Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STAB2
  • Mouse genes Stab2
  • Rat genes Stab2
  • Zfish genes stab2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stab2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0038024	cargo receptor activity	Stab2	IMP	MGI:MGI:5318244	Mouse	PMID:22371575
Molecular Function	GO:0005540	hyaluronic acid binding	Stab2	IDA		Rat	PMID:12181351|RGD:625583
Molecular Function	GO:0030169	low-density lipoprotein particle binding	STAB2	IDA		Human	PMID:12077138
Molecular Function	GO:0005041	low-density lipoprotein particle receptor activity	STAB2	IDA		Human	PMID:12077138
Molecular Function	GO:0005515	protein binding	STAB2	IPI	UniProtKB:P20065	Human	PMID:18519035
Molecular Function	GO:0005044	scavenger receptor activity	STAB2	IDA		Human	PMID:12077138
Molecular Function	GO:0005044	scavenger receptor activity	stab2	IMP	ZFIN:ZDB-GENO-230127-7	Zfish	PMID:33838334
Molecular Function	GO:0005044	scavenger receptor activity	stab2	IGI	ZFIN:ZDB-GENO-230127-12	Zfish	PMID:33838334
Cellular Component	GO:0005829	cytosol	STAB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0009897	external side of plasma membrane	Stab2	IDA		Rat	PMID:12181351|RGD:625583
Cellular Component	GO:0005886	plasma membrane	STAB2	IDA		Human	PMID:12077138
Biological Process	GO:0001568	blood vessel development	stab2	IMP	ZFIN:ZDB-MRPHLNO-140924-3	Zfish	PMID:24586357
Biological Process	GO:0001568	blood vessel development	stab2	IMP	ZFIN:ZDB-MRPHLNO-130424-1,ZFIN:ZDB-MRPHLNO-140924-3	Zfish	PMID:24586357
Biological Process	GO:0001568	blood vessel development	stab2	IGI	ZFIN:ZDB-MRPHLNO-130424-1,ZFIN:ZDB-MRPHLNO-140924-3,ZFIN:ZDB-MRPHLNO-140924-4	Zfish	PMID:24586357
Biological Process	GO:0001568	blood vessel development	stab2	IMP	ZFIN:ZDB-MRPHLNO-130424-1	Zfish	PMID:24586357
Biological Process	GO:0060837	blood vessel endothelial cell differentiation	stab2	IMP	ZFIN:ZDB-MRPHLNO-130424-1,ZFIN:ZDB-MRPHLNO-140924-3	Zfish	PMID:24586357
Biological Process	GO:0042742	defense response to bacterium	STAB2	IDA		Human	PMID:12077138
Biological Process	GO:0050830	defense response to Gram-positive bacterium	STAB2	IDA		Human	PMID:11829752
Biological Process	GO:0006897	endocytosis	Stab2	IDA		Rat	PMID:12181351|RGD:625583
Biological Process	GO:0030214	hyaluronan catabolic process	Stab2	IMP	MGI:MGI:5318244	Mouse	PMID:22371575
Biological Process	GO:1901492	positive regulation of lymphangiogenesis	stab2	IMP	ZFIN:ZDB-MRPHLNO-130424-3	Zfish	PMID:23484014
Biological Process	GO:1901492	positive regulation of lymphangiogenesis	stab2	IMP	ZFIN:ZDB-MRPHLNO-130424-2	Zfish	PMID:23484014
Biological Process	GO:0006898	receptor-mediated endocytosis	Stab2	IMP	MGI:MGI:5318244	Mouse	PMID:22371575

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern