Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STAC
  • Mouse genes Stac
  • Rat genes Stac
  • Zfish genes stac
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stac

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P62258	Human	PMID:16260042
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q9UGN5	Human	PMID:21812934
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P62258	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P0DPK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P26367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P51692	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P78424	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q02548	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q8N8K9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q9BRK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q9H0X6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q9NZQ3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q86V38	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q92876	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	STAC	IPI	UniProtKB:Q9UMX0	Human	PMID:32814053
Molecular Function	GO:0044325	transmembrane transporter binding	Stac	IPI	UniProtKB:O95180	Mouse	MGI:MGI:6107356|PMID:27149520
Cellular Component	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	Stac	IDA		Mouse	MGI:MGI:6159321|PMID:29467163
Cellular Component	GO:0030315	T-tubule	Stac	IDA		Mouse	PMID:23818578
Biological Process	GO:0034605	cellular response to heat	Stac	IDA		Mouse	PMID:18755693
Biological Process	GO:0006936	muscle contraction	Stac	IMP	MGI:MGI:4365152	Mouse	PMID:23818578
Biological Process	GO:2001259	positive regulation of cation channel activity	Stac	IMP		Mouse	MGI:MGI:6107356|PMID:27149520
Biological Process	GO:1903078	positive regulation of protein localization to plasma membrane	Stac	IMP		Mouse	MGI:MGI:6107356|PMID:27149520
Biological Process	GO:1903078	positive regulation of protein localization to plasma membrane	Stac	IMP		Mouse	MGI:MGI:6159321|PMID:29467163
Biological Process	GO:1901387	positive regulation of voltage-gated calcium channel activity	Stac	IMP		Mouse	MGI:MGI:6159321|PMID:29467163
Biological Process	GO:1901385	regulation of voltage-gated calcium channel activity	Stac	IMP	MGI:MGI:4365152	Mouse	PMID:23818578

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern