Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STAG1
  • Mouse genes Stag1
  • Rat genes Stag1
  • Zfish genes stag1a,stag1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stag1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Stag1	IDA		Mouse	PMID:22415368
Molecular Function	GO:0003682	chromatin binding	Stag1	IDA		Mouse	PMID:22780989
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q29RF7	Human	PMID:15855230
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9NTI5	Human	PMID:15855230
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:15855230
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:16682347
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:17112726
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q29RF7	Human	PMID:17113138
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9NTI5	Human	PMID:17113138
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:17113138
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:17349791
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:P54274	Human	PMID:17962804
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q8N3U4	Human	PMID:17962804
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:17962804
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:22885700
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q8N3U4	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q8N3U4	Human	PMID:29867216
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9NTI5	Human	PMID:29867216
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q9UQE7	Human	PMID:29867216
Molecular Function	GO:0005515	protein binding	STAG1	IPI	UniProtKB:Q8N3U4	Human	PMID:30021884
Cellular Component	GO:0000785	chromatin	STAG1	IDA		Human	PMID:16682347
Cellular Component	GO:0000785	chromatin	Stag1	IDA		Mouse	PMID:23920377
Cellular Component	GO:0008278	cohesin complex	STAG1	IDA		Human	PMID:11590136
Cellular Component	GO:0008278	cohesin complex	STAG1	IDA		Human	PMID:22628566
Cellular Component	GO:0097431	mitotic spindle pole	STAG1	IDA		Human	PMID:11590136
Cellular Component	GO:0016604	nuclear body	STAG1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016363	nuclear matrix	STAG1	IDA		Human	PMID:11590136
Cellular Component	GO:0005654	nucleoplasm	STAG1	IDA		Human	GO_REF:0000052
Biological Process	GO:0051179	localization	STAG1	IDA		Human	PMID:22715410
Biological Process	GO:0051179	localization	STAG1	IMP		Human	PMID:22715410
Biological Process	GO:0090307	mitotic spindle assembly	STAG1	IMP		Human	PMID:11590136
Biological Process	GO:1901532	regulation of hematopoietic progenitor cell differentiation	stag1a	IMP	ZFIN:ZDB-GENO-220405-15	Zfish	PMID:33365313
Biological Process	GO:2001212	regulation of vasculogenesis	stag1a	IMP	ZFIN:ZDB-GENO-220405-15	Zfish	PMID:33365313

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern