Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STAM
  • Mouse genes Stam
  • Rat genes Stam
  • Zfish genes stam
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stam

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O95630	Human	PMID:10383417
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O95630	Human	PMID:16730941
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O95630	Human	PMID:17078930
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:Q13094	Human	PMID:17235283
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:P0CG48	Human	PMID:19111546
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964	Human	PMID:19278655
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:P0CG48	Human	PMID:20150893
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:P0CG53	Human	PMID:20150893
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964	Human	PMID:24790097
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964,UniProtKB:Q8TDB6,UniProtKB:Q96J02	Human	PMID:24790097
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	STAM	IPI	UniProtKB:O14964	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Stam	IPI	PR:Q80U87	Mouse	PMID:10982817
Molecular Function	GO:0005515	protein binding	Stam	IPI	RGD:621801	Rat	PMID:12745081|RGD:724770
Molecular Function	GO:0044389	ubiquitin-like protein ligase binding	STAM	IPI	UniProtKB:Q8TDB6	Human	PMID:24790097
Cellular Component	GO:0033565	ESCRT-0 complex	STAM	IPI		Human	PMID:19278655
Cellular Component	GO:0033565	ESCRT-0 complex	STAM	IDA		Human	PMID:24790097
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	STAM	IDA		Human	GO_REF:0000052
Biological Process	GO:1903543	positive regulation of exosomal secretion	STAM	IMP		Human	PMID:24105262
Biological Process	GO:1903551	regulation of extracellular exosome assembly	STAM	IMP		Human	PMID:24105262

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern