Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STARD3NL
  • Mouse genes Stard3nl
  • Rat genes Stard3nl
  • Zfish genes stard3nl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stard3nl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015485	cholesterol binding	STARD3NL	IDA		Human	PMID:15718238
Molecular Function	GO:0005515	protein binding	STARD3NL	IPI	UniProtKB:Q14849	Human	PMID:15718238
Molecular Function	GO:0005515	protein binding	STARD3NL	IPI	UniProtKB:O95292	Human	PMID:24105263
Molecular Function	GO:0005515	protein binding	STARD3NL	IPI	UniProtKB:Q8NHP6	Human	PMID:29858488
Molecular Function	GO:0005515	protein binding	STARD3NL	IPI	UniProtKB:Q9UBK5	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	STARD3NL	IDA		Human	PMID:15718238
Cellular Component	GO:0005789	endoplasmic reticulum membrane	STARD3NL	IDA		Human	PMID:24105263
Cellular Component	GO:0140284	endoplasmic reticulum-endosome membrane contact site	STARD3NL	IDA		Human	PMID:24105263
Cellular Component	GO:0005768	endosome	STARD3NL	IDA		Human	PMID:29858488
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	STARD3NL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031902	late endosome membrane	STARD3NL	IDA		Human	PMID:24105263
Cellular Component	GO:0005765	lysosomal membrane	STARD3NL	HDA		Human	PMID:17897319
Cellular Component	GO:0016020	membrane	STARD3NL	HDA		Human	PMID:19946888
Cellular Component	GO:0044232	organelle membrane contact site	STARD3NL	IDA		Human	PMID:24105263
Cellular Component	GO:0044232	organelle membrane contact site	STARD3NL	IDA		Human	PMID:29858488
Biological Process	GO:0099044	vesicle tethering to endoplasmic reticulum	STARD3NL	IDA		Human	PMID:24105263

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern