Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STN1
  • Mouse genes Stn1
  • Rat genes Stn1
  • Zfish genes stn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q96AP0	Human	PMID:19648609
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q2NKJ3	Human	PMID:19854130
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q86WV5	Human	PMID:19854130
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:O14773-1	Human	PMID:22763445
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q2NKJ3	Human	PMID:22763445
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q2NKJ3-1	Human	PMID:22763445
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q86WV5	Human	PMID:22763445
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q96AP0	Human	PMID:22763445
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q5SW96	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q5SW96	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q2NKJ3	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q5SW96	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q86WV5	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:P51687	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q13064	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q5SW96	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q86WV5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q8N7C3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q8TCE9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q99757	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q9BT92	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q9H0E2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q9NWQ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q9NX04	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:Q9P2K3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STN1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Stn1	IPI	UniProtKB:Q5SUQ9	Mouse	MGI:MGI:4441245|PMID:19119139
Molecular Function	GO:0005515	protein binding	Stn1	IPI	UniProtKB:Q5EE38	Mouse	MGI:MGI:4441116|PMID:19648609
Molecular Function	GO:0003697	single-stranded DNA binding	Stn1	IDA		Mouse	MGI:MGI:4441245|PMID:19119139
Molecular Function	GO:0043047	single-stranded telomeric DNA binding	STN1	IDA		Human	PMID:19648609
Molecular Function	GO:0042162	telomeric DNA binding	STN1	IDA		Human	PMID:19854130
Molecular Function	GO:0042162	telomeric DNA binding	Stn1	IDA		Mouse	MGI:MGI:4441108|PMID:19854130
Cellular Component	GO:0000781	chromosome, telomeric region	STN1	HDA		Human	PMID:19135898
Cellular Component	GO:0000781	chromosome, telomeric region	STN1	IDA		Human	PMID:19648609
Cellular Component	GO:0000781	chromosome, telomeric region	STN1	IDA		Human	PMID:19854130
Cellular Component	GO:0000781	chromosome, telomeric region	Stn1	IDA		Mouse	MGI:MGI:4441108|PMID:19854130
Cellular Component	GO:1990879	CST complex	STN1	IDA		Human	PMID:19854130
Cellular Component	GO:1990879	CST complex	STN1	IDA		Human	PMID:22763445
Cellular Component	GO:1990879	CST complex	Stn1	IDA		Mouse	MGI:MGI:4441108|PMID:19854130
Cellular Component	GO:0001650	fibrillar center	STN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045111	intermediate filament cytoskeleton	STN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	STN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	STN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	STN1	IDA		Human	PMID:19854130
Cellular Component	GO:0005634	nucleus	Stn1	IDA		Mouse	MGI:MGI:4441108|PMID:19854130
Cellular Component	GO:0005634	nucleus	Stn1	IDA		Mouse	MGI:MGI:4441245|PMID:19119139
Biological Process	GO:0032211	negative regulation of telomere maintenance via telomerase	STN1	IDA		Human	PMID:22763445
Biological Process	GO:0045740	positive regulation of DNA replication	Stn1	IDA		Mouse	MGI:MGI:4441245|PMID:19119139
Biological Process	GO:0000723	telomere maintenance	STN1	IMP		Human	PMID:19854130
Biological Process	GO:0010833	telomere maintenance via telomere lengthening	STN1	IMP		Human	PMID:19648609
Biological Process	GO:0001944	vasculature development	stn1	IMP	ZFIN:ZDB-MRPHLNO-161013-4	Zfish	PMID:27432940

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern