Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Stom

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes STOM
- Mouse genes Stom
- Rat genes Stom
- Zfish genes stom
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stom

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	STOM	IPI	UniProtKB:P27105	Human	PMID:32296183
Molecular Function	GO:0042802	identical protein binding	STOM	IPI	UniProtKB:P27105	Human	PMID:9642292
Molecular Function	GO:0042802	identical protein binding	Stom	IPI	UniProtKB:P54116	Mouse	MGI:MGI:5441174\|PMID:22850675
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9UBI4	Human	PMID:19696025
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P02730	Human	PMID:23219802
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9WMX2:PRO_0000037552	Human	PMID:25262680
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q92997	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P02730	Human	PMID:28387307
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:A0A0C4DFN3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:A0PK00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:A0PK11	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:I3L0A0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O00155	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O00180	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O00767	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O14798	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O43169	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O43752	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O43916	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O60883	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O75379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:O95562	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P00387	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P01375	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P02652	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P06681	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P0DJD7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P27449	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P30519	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P42167	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P50281	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P54709	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:P54849	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q01453	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q12981	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q13635-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q14416	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q14508	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q16617	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q4LDR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q5BVD1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q5QGT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q5TGU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q86UP2-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8N661	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8N6F1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8N6R1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8TBE1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8TBM7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8TD22	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8WV19	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q8WWP7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q92843	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q969S0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q969S6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q96DZ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q96EC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q96F15	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q96IV6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q99437	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9BTX3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9BVC6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9BWH2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9BXR6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9C0I4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9H2L4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9H9B4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NRQ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NS64	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NV12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NVV5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9NZ01	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9P0S3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9UBM1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9UIQ6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9UKR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9Y2Y6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9Y4D2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOM	IPI	UniProtKB:Q9Y6D0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Stom	IPI	UniProtKB:P54116	Mouse	MGI:MGI:5441174\|PMID:22850675
Molecular Function	GO:0005515	protein binding	Stom	IPI	UniProtKB:O35240	Mouse	MGI:MGI:5441174\|PMID:22850675
Molecular Function	GO:0005515	protein binding	Stom	IPI	RGD:3704	Rat	PMID:10562431\|RGD:1598919
Molecular Function	GO:0042803	protein homodimerization activity	Stom	IPI	UniProtKB:P54116	Mouse	MGI:MGI:5441174\|PMID:22850675
Molecular Function	GO:0070063	RNA polymerase binding	STOM	IPI	UniProtKB:Q9WMX2:PRO_0000037552	Human	PMID:25262680
Cellular Component	GO:0072562	blood microparticle	STOM	HDA		Human	PMID:22516433
Cellular Component	GO:0005737	cytoplasm	Stom	IDA		Mouse	MGI:MGI:5616479\|PMID:25262680
Cellular Component	GO:0005856	cytoskeleton	STOM	IDA		Human	PMID:1547348
Cellular Component	GO:0005783	endoplasmic reticulum	STOM	IDA		Human	PMID:25262680
Cellular Component	GO:0070062	extracellular exosome	STOM	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	STOM	HDA		Human	PMID:21362503
Cellular Component	GO:0070062	extracellular exosome	STOM	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	STOM	HDA		Human	PMID:16502470
Cellular Component	GO:0016020	membrane	STOM	HDA		Human	PMID:19946888
Cellular Component	GO:0045121	membrane raft	STOM	IDA		Human	PMID:12130500
Cellular Component	GO:0005739	mitochondrion	STOM	IDA		Human	PMID:25262680
Cellular Component	GO:0005739	mitochondrion	Stom	IDA		Mouse	MGI:MGI:5616479\|PMID:25262680
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Stom	IDA		Mouse	MGI:MGI:5616479\|PMID:25262680
Cellular Component	GO:0005886	plasma membrane	STOM	IDA		Human	PMID:1547348
Cellular Component	GO:0005886	plasma membrane	STOM	IDA		Human	PMID:9642292
Cellular Component	GO:0005886	plasma membrane	Stom	IDA		Mouse	MGI:MGI:5441174\|PMID:22850675
Cellular Component	GO:0031982	vesicle	STOM	HDA		Human	PMID:19190083
Biological Process	GO:0044829	positive regulation by host of viral genome replication	Stom	IMP		Mouse	MGI:MGI:5616479\|PMID:25262680
Biological Process	GO:0090314	positive regulation of protein targeting to membrane	Stom	IMP		Mouse	MGI:MGI:5616479\|PMID:25262680
Biological Process	GO:0048524	positive regulation of viral process	Stom	IMP		Mouse	MGI:MGI:5616479\|PMID:25262680
Biological Process	GO:1901585	regulation of acid-sensing ion channel activity	Stom	IDA		Mouse	MGI:MGI:5441174\|PMID:22850675
Biological Process	GO:0034765	regulation of monoatomic ion transmembrane transport	Stom	IDA		Mouse	MGI:MGI:5441174\|PMID:22850675

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.