Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STRBP
  • Mouse genes Strbp
  • Rat genes Strbp
  • Zfish genes strbp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Strbp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003725	double-stranded RNA binding	Strbp	IDA		Mouse	PMID:7744952
Molecular Function	GO:0008017	microtubule binding	Strbp	IDA		Mouse	PMID:9674995
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q93062	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9NVV9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:O75553	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q15633	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q93062	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9NVV9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q93062-3	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9H898-2	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9NWB1-5	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:O75569	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:O95793	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:P78563-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q13555-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q6ZRY4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9NVV9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9UGU5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRBP	IPI	UniProtKB:Q9UL40	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	STRBP	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	STRBP	HDA		Human	PMID:22681889
Molecular Function	GO:0003727	single-stranded RNA binding	Strbp	IDA		Mouse	PMID:7744952
Molecular Function	GO:0015631	tubulin binding	Strbp	IDA		Mouse	PMID:9674995
Cellular Component	GO:0002177	manchette	Strbp	IDA		Mouse	PMID:9674995
Cellular Component	GO:0015630	microtubule cytoskeleton	Strbp	IDA		Mouse	PMID:7744952
Cellular Component	GO:0005634	nucleus	STRBP	IDA		Human	GO_REF:0000054
Biological Process	GO:0007638	mechanosensory behavior	Strbp	IMP	MGI:MGI:3033751	Mouse	PMID:11336498
Biological Process	GO:0007286	spermatid development	Strbp	IMP	MGI:MGI:3033751	Mouse	PMID:11336498

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern