Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STX16
  • Mouse genes Stx16
  • Rat genes Stx16
  • Zfish genes stx16
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stx16

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:Q8IWJ2	Human	PMID:18195106
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:O95183	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:Q12846	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:Q9H115	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:O94812	Human	PMID:28626000
Molecular Function	GO:0005515	protein binding	STX16	IPI	UniProtKB:O95183	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	Stx16	IPI	UniProtKB:O08700	Mouse	MGI:MGI:5508594|PMID:18337752
Molecular Function	GO:0005515	protein binding	Stx16	IPI	PR:Q8C838	Mouse	PMID:26629404
Molecular Function	GO:0005515	protein binding	Stx16	IPI	PR:P14142	Mouse	PMID:26629404
Molecular Function	GO:0005484	SNAP receptor activity	STX16	IDA		Human	PMID:15215310
Molecular Function	GO:0019905	syntaxin binding	STX16	IPI	UniProtKB:O43752	Human	PMID:16154903
Cellular Component	GO:0005737	cytoplasm	STX16	IDA		Human	PMID:9587053
Cellular Component	GO:0005925	focal adhesion	STX16	HDA		Human	PMID:21423176
Cellular Component	GO:0005794	Golgi apparatus	STX16	IDA		Human	PMID:9464276
Cellular Component	GO:0005794	Golgi apparatus	Stx16	IDA		Mouse	PMID:18321981
Cellular Component	GO:0031985	Golgi cisterna	STX16	IDA		Human	PMID:17389686
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	STX16	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	STX16	IDA		Human	PMID:9587053
Cellular Component	GO:0048471	perinuclear region of cytoplasm	STX16	IDA		Human	PMID:16154903
Cellular Component	GO:0031201	SNARE complex	STX16	IDA		Human	PMID:19620288
Cellular Component	GO:0030672	synaptic vesicle membrane	Stx16	EXP		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0030672	synaptic vesicle membrane	Stx16	IDA		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0005802	trans-Golgi network	STX16	IDA		Human	PMID:16154903
Biological Process	GO:0032456	endocytic recycling	STX16	IMP		Human	PMID:23677696
Biological Process	GO:0039023	pronephric duct morphogenesis	stx16	IMP	ZFIN:ZDB-MRPHLNO-130611-1	Zfish	PMID:23626741
Biological Process	GO:0039023	pronephric duct morphogenesis	stx16	IMP	ZFIN:ZDB-MRPHLNO-130611-2	Zfish	PMID:23626741
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	STX16	IDA		Human	PMID:15215310
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	STX16	IMP		Human	PMID:17389686
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	STX16	IDA		Human	PMID:18195106

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern