Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPT16H
  • Mouse genes Supt16
  • Rat genes Supt16h
  • Zfish genes supt16h
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supt16

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:P33991	Human	PMID:16902406
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:Q08945	Human	PMID:16902406
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:Q08945	Human	PMID:19214185
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:Q08945	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:Q08945	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:Q08945	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	SUPT16H	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	SUPT16H	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SUPT16H	HDA		Human	PMID:22681889
Cellular Component	GO:0035101	FACT complex	SUPT16H	IPI		Human	PMID:16902406
Cellular Component	GO:0005654	nucleoplasm	SUPT16H	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SUPT16H	IDA		Human	PMID:9489704
Biological Process	GO:0006337	nucleosome disassembly	SUPT16H	IDA		Human	PMID:16902406

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern