Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPT3H
  • Mouse genes Supt3
  • Rat genes Supt3h
  • Zfish genes supt3h
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supt3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003713	transcription coactivator activity	SUPT3H	IDA		Human	PMID:11564863
Cellular Component	GO:0005654	nucleoplasm	SUPT3H	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SUPT3H	IDA		Human	PMID:11564863
Cellular Component	GO:0005634	nucleus	SUPT3H	IDA		Human	PMID:9726987
Cellular Component	GO:0000124	SAGA complex	SUPT3H	IDA		Human	PMID:11564863
Cellular Component	GO:0000124	SAGA complex	Supt3	IDA		Mouse	PMID:28893950
Cellular Component	GO:0033276	transcription factor TFTC complex	SUPT3H	IDA		Human	PMID:10373431
Biological Process	GO:0043966	histone H3 acetylation	SUPT3H	IDA		Human	PMID:10373431
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	SUPT3H	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	SUPT3H	IDA		Human	PMID:18206972
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	SUPT3H	IDA		Human	PMID:9603525

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern