Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPT4H1
  • Mouse genes Supt4b
  • Rat genes
  • Zfish genes supt4h1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supt4b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:10075709
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:17404243
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:25502805
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:26789250
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:31515488
Molecular Function	GO:0046982	protein heterodimerization activity	SUPT4H1	IPI	UniProtKB:O00267	Human	PMID:9450929
Cellular Component	GO:0032044	DSIF complex	SUPT4H1	IPI		Human	PMID:19860741
Cellular Component	GO:0032044	DSIF complex	SUPT4H1	IDA		Human	PMID:9450929
Cellular Component	GO:0005654	nucleoplasm	SUPT4H1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0032785	negative regulation of DNA-templated transcription, elongation	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0032785	negative regulation of DNA-templated transcription, elongation	SUPT4H1	IDA		Human	PMID:9857195
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9857195
Biological Process	GO:0032786	positive regulation of DNA-templated transcription, elongation	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0034243	regulation of transcription elongation by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9450929
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	SUPT4H1	IDA		Human	PMID:9857195

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern