Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPT6H
  • Mouse genes Supt6
  • Rat genes Supt6h
  • Zfish genes supt6h
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supt6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042393	histone binding	SUPT6H	IDA		Human	PMID:10933715
Molecular Function	GO:0005515	protein binding	SUPT6H	IPI	UniProtKB:P16749	Human	PMID:10933715
Molecular Function	GO:0005515	protein binding	SUPT6H	IPI	UniProtKB:P04626	Human	PMID:16273093
Molecular Function	GO:0005515	protein binding	SUPT6H	IPI	UniProtKB:P24928	Human	PMID:17234882
Molecular Function	GO:0005515	protein binding	SUPT6H	IPI	UniProtKB:Q96ST2	Human	PMID:19141475
Molecular Function	GO:0005515	protein binding	SUPT6H	IPI	UniProtKB:Q9GZX7	Human	PMID:21518874
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:O15047	Mouse	MGI:MGI:5448791|PMID:22843687
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:O70546	Mouse	MGI:MGI:5484727|PMID:23503590
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:Q6ZQL4	Mouse	MGI:MGI:6323527|PMID:31128943
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:P24928|UniProtKB:Q96ST2	Mouse	MGI:MGI:5508611|PMID:17234882
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:P08775|UniProtKB:Q96ST2	Mouse	MGI:MGI:5508586|PMID:19141475
Molecular Function	GO:0005515	protein binding	Supt6	IPI	UniProtKB:Q9WVE0	Mouse	MGI:MGI:5004983|PMID:21518874
Molecular Function	GO:0003723	RNA binding	SUPT6H	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SUPT6H	HDA		Human	PMID:22681889
Biological Process	GO:0001825	blastocyst formation	Supt6	IMP		Mouse	PMID:27869233
Biological Process	GO:0035050	embryonic heart tube development	supt6h	IMP	ZFIN:ZDB-GENO-071113-3	Zfish	PMID:17570355
Biological Process	GO:0035050	embryonic heart tube development	supt6h	IMP	ZFIN:ZDB-GENO-980202-349	Zfish	PMID:10491254
Biological Process	GO:0007507	heart development	supt6h	IMP	ZFIN:ZDB-GENO-040728-8	Zfish	PMID:19652097
Biological Process	GO:0061086	negative regulation of histone H3-K27 methylation	supt6h	IMP		Zfish	PMID:23503590|ZFIN:ZDB-PUB-130405-14
Biological Process	GO:0071599	otic vesicle development	supt6h	IMP		Zfish	PMID:9007247
Biological Process	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	SUPT6H	IMP		Human	PMID:17234882
Biological Process	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	Supt6	IMP		Mouse	MGI:MGI:5508611|PMID:17234882
Biological Process	GO:0045191	regulation of isotype switching	Supt6	IMP		Mouse	MGI:MGI:5004983|PMID:21518874
Biological Process	GO:0010793	regulation of mRNA export from nucleus	Supt6	IMP		Mouse	MGI:MGI:5508611|PMID:17234882
Biological Process	GO:0050684	regulation of mRNA processing	Supt6	IMP		Mouse	MGI:MGI:5508611|PMID:17234882
Biological Process	GO:0051147	regulation of muscle cell differentiation	Supt6	IMP		Mouse	MGI:MGI:5484727|PMID:23503590
Biological Process	GO:0001756	somitogenesis	supt6h	IMP	ZFIN:ZDB-GENO-071113-3	Zfish	PMID:17570355
Biological Process	GO:0140673	transcription elongation-coupled chromatin remodeling	SUPT6H	IMP		Human	PMID:23503590
Biological Process	GO:0140673	transcription elongation-coupled chromatin remodeling	Supt6	IMP		Mouse	MGI:MGI:5484727|PMID:23503590

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern