Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SVEP1
  • Mouse genes Svep1
  • Rat genes Svep1
  • Zfish genes svep1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Svep1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Svep1	IDA		Mouse	PMID:15522233
Molecular Function	GO:0005515	protein binding	Svep1	IPI	PR:O35608	Mouse	PMID:28179430
Molecular Function	GO:0005515	protein binding	Svep1	IPI	PR:O08538	Mouse	PMID:28179430
Cellular Component	GO:0005737	cytoplasm	SVEP1	IDA		Human	PMID:27892606
Cellular Component	GO:0005615	extracellular space	Svep1	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Svep1	IDA		Mouse	PMID:28179430
Cellular Component	GO:0005634	nucleus	SVEP1	IDA		Human	PMID:27892606
Biological Process	GO:0016477	cell migration	svep1	IMP		Zfish	PMID:28179432|ZFIN:ZDB-PUB-170210-6
Biological Process	GO:0009913	epidermal cell differentiation	svep1	IMP	ZFIN:ZDB-MRPHLNO-171107-9	Zfish	PMID:27892606
Biological Process	GO:0008544	epidermis development	Svep1	IMP	MGI:MGI:5509058	Mouse	PMID:27892606
Biological Process	GO:0090136	epithelial cell-cell adhesion	svep1	IMP		Zfish	PMID:27892606|ZFIN:ZDB-PUB-161129-3
Biological Process	GO:0010467	gene expression	Svep1	IMP	MGI:MGI:6188639	Mouse	PMID:28179430
Biological Process	GO:0003017	lymph circulation	Svep1	IMP	MGI:MGI:6188639	Mouse	PMID:28179430
Biological Process	GO:0001945	lymph vessel development	Svep1	IMP	MGI:MGI:5286317	Mouse	PMID:28179432
Biological Process	GO:0001945	lymph vessel development	svep1	IMP	ZFIN:ZDB-GENO-170706-4	Zfish	PMID:28179432
Biological Process	GO:0001945	lymph vessel development	svep1	IMP	ZFIN:ZDB-GENO-170817-7	Zfish	PMID:28179432
Biological Process	GO:0001945	lymph vessel development	svep1	IMP	ZFIN:ZDB-GENO-170719-2	Zfish	PMID:28179430
Biological Process	GO:0001945	lymph vessel development	svep1	IMP	ZFIN:ZDB-MRPHLNO-170630-1	Zfish	PMID:28179430
Biological Process	GO:0001945	lymph vessel development	svep1	IMP	ZFIN:ZDB-GENO-170817-8	Zfish	PMID:28179432
Biological Process	GO:0036303	lymph vessel morphogenesis	Svep1	IMP	MGI:MGI:5286317	Mouse	PMID:28179432
Biological Process	GO:0036303	lymph vessel morphogenesis	Svep1	IMP	MGI:MGI:6188639	Mouse	PMID:28179430
Biological Process	GO:0036303	lymph vessel morphogenesis	svep1	IMP		Zfish	PMID:28179430|ZFIN:ZDB-PUB-170210-7
Biological Process	GO:0048014	Tie signaling pathway	Svep1	IMP	MGI:MGI:6188639	Mouse	PMID:28179430
Biological Process	GO:0120193	tight junction organization	Svep1	IMP	MGI:MGI:5286317	Mouse	PMID:28179432

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern