Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SWI5
  • Mouse genes Swi5
  • Rat genes RGD1561465,Swi5
  • Zfish genes swi5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Swi5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SWI5	IPI	UniProtKB:Q06609	Human	PMID:21252223
Molecular Function	GO:0005515	protein binding	SWI5	IPI	UniProtKB:Q06609	Human	PMID:23754376
Molecular Function	GO:0005515	protein binding	Swi5	IPI	UniProtKB:Q08297	Mouse	MGI:MGI:4868525|PMID:20976249
Cellular Component	GO:0005634	nucleus	Swi5	IDA		Mouse	MGI:MGI:4868525|PMID:20976249
Cellular Component	GO:0032798	Swi5-Sfr1 complex	SWI5	IDA		Human	PMID:21252223
Cellular Component	GO:0032798	Swi5-Sfr1 complex	Swi5	IDA		Mouse	MGI:MGI:4868525|PMID:20976249
Biological Process	GO:0071479	cellular response to ionizing radiation	SWI5	IDA		Human	PMID:23754376
Biological Process	GO:0000724	double-strand break repair via homologous recombination	SWI5	IMP		Human	PMID:21252223
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Swi5	IMP		Mouse	MGI:MGI:4868525|PMID:20976249

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern