Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYCE3
  • Mouse genes Syce3
  • Rat genes Syce3
  • Zfish genes zgc:194246
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Syce3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q96CS2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q9UL45	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q96CS2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q16512	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q5XKE5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q96ES7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:P60891	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYCE3	IPI	UniProtKB:Q9BVL2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Syce3	IPI	UniProtKB:Q3KQP7	Mouse	MGI:MGI:6400008|PMID:30949703
Molecular Function	GO:0005515	protein binding	Syce3	IPI	UniProtKB:Q505B8|UniProtKB:Q9D495	Mouse	MGI:MGI:5008660|PMID:21637789
Cellular Component	GO:0000801	central element	Syce3	IDA		Mouse	MGI:MGI:5008660|PMID:21637789
Cellular Component	GO:0000801	central element	Syce3	IDA		Mouse	PMID:22164254
Cellular Component	GO:0005694	chromosome	Syce3	IDA		Mouse	MGI:MGI:5008660|PMID:21637789
Cellular Component	GO:0005694	chromosome	Syce3	IDA		Mouse	MGI:MGI:6400008|PMID:30949703
Cellular Component	GO:0005634	nucleus	Syce3	IDA		Mouse	MGI:MGI:5008660|PMID:21637789
Biological Process	GO:0006915	apoptotic process	Syce3	IDA		Mouse	PMID:20407872
Biological Process	GO:0035234	ectopic germ cell programmed cell death	Syce3	IDA		Mouse	PMID:20407872
Biological Process	GO:0043065	positive regulation of apoptotic process	Syce3	IDA		Mouse	PMID:20407872
Biological Process	GO:0051094	positive regulation of developmental process	Syce3	IDA		Mouse	PMID:20407872
Biological Process	GO:2000243	positive regulation of reproductive process	Syce3	IDA		Mouse	PMID:20407872
Biological Process	GO:0007131	reciprocal meiotic recombination	Syce3	IMP		Mouse	MGI:MGI:5008660|PMID:21637789
Biological Process	GO:0007283	spermatogenesis	Syce3	IMP		Mouse	MGI:MGI:5008660|PMID:21637789
Biological Process	GO:0007130	synaptonemal complex assembly	Syce3	IMP		Mouse	MGI:MGI:5008660|PMID:21637789

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern