Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYCP3
  • Mouse genes Sycp3
  • Rat genes Sycp3
  • Zfish genes sycp3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sycp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYCP3	IPI	UniProtKB:Q16543	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYCP3	IPI	UniProtKB:Q9NWQ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYCP3	IPI	UniProtKB:Q9UBU9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sycp3	IPI	UniProtKB:Q61545,UniProtKB:Q62209,UniProtKB:Q8C5S7,UniProtKB:Q96EQ9|UniProtKB:Q61545,UniProtKB:Q62209,UniProtKB:Q96EQ9|UniProtKB:Q62209,UniProtKB:Q8C5S7,UniProtKB:Q96EQ9	Mouse	MGI:MGI:6355525|PMID:27932493
Molecular Function	GO:0005515	protein binding	Sycp3	IPI	PR:Q8C5S7	Mouse	PMID:12759374
Molecular Function	GO:0005515	protein binding	Sycp3	IPI	PR:Q9CW03	Mouse	PMID:12759374
Molecular Function	GO:0005515	protein binding	Sycp3	IPI	PR:Q920F6	Mouse	PMID:12759374
Molecular Function	GO:0005515	protein binding	Sycp3	IPI	PR:Q9CUU3	Mouse	PMID:16717126
Cellular Component	GO:0005694	chromosome	Sycp3	IDA		Mouse	MGI:MGI:6272683|PMID:30272023
Cellular Component	GO:0005694	chromosome	Sycp3	IDA		Mouse	MGI:MGI:6478065|PMID:30746471
Cellular Component	GO:0005694	chromosome	Sycp3	IDA		Mouse	MGI:MGI:6400008|PMID:30949703
Cellular Component	GO:0005694	chromosome	Sycp3	IDA		Mouse	PMID:10794082
Cellular Component	GO:0000775	chromosome, centromeric region	Sycp3	IDA		Mouse	MGI:MGI:5905073|PMID:28380054
Cellular Component	GO:0000793	condensed chromosome	Sycp3	IDA		Mouse	PMID:10809667
Cellular Component	GO:0000793	condensed chromosome	Sycp3	IDA		Mouse	PMID:12091911
Cellular Component	GO:0000793	condensed chromosome	Sycp3	IDA		Mouse	PMID:19625504
Cellular Component	GO:0000793	condensed chromosome	Sycp3	IDA		Mouse	PMID:12591952
Cellular Component	GO:0000793	condensed chromosome	Sycp3	IDA		Mouse	PMID:17784788
Cellular Component	GO:0000779	condensed chromosome, centromeric region	Sycp3	IDA		Mouse	PMID:22854038
Cellular Component	GO:0000794	condensed nuclear chromosome	Sycp3	IDA		Mouse	PMID:24891606
Cellular Component	GO:0000794	condensed nuclear chromosome	Sycp3	IDA		Mouse	PMID:22863743
Cellular Component	GO:0000794	condensed nuclear chromosome	Sycp3	IDA		Mouse	PMID:24589552
Cellular Component	GO:0000794	condensed nuclear chromosome	Sycp3	IDA		Mouse	PMID:18316482
Cellular Component	GO:0000794	condensed nuclear chromosome	Sycp3	IDA		Mouse	PMID:21621532
Cellular Component	GO:0001674	female germ cell nucleus	Sycp3	IDA		Mouse	PMID:21621532
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	MGI:MGI:1352918|PMID:10678170
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:25675407
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:18802469
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:25533956
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:23133398
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:21539824
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:23555294
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:21743440
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:22011390
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:22854038
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:22711701
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Mouse	PMID:19283064
Cellular Component	GO:0000800	lateral element	Sycp3	IDA		Rat	PMID:9933407|RGD:11035335
Cellular Component	GO:0001673	male germ cell nucleus	Sycp3	IDA		Mouse	PMID:17696610
Cellular Component	GO:0005634	nucleus	SYCP3	IDA		Human	PMID:22899867
Cellular Component	GO:0000795	synaptonemal complex	SYCP3	IDA		Human	PMID:9774970
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:26358182
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:27856912
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:22854038
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:26490168
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:14736746
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:20551173
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:30718482
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:16968740
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:12815066
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:16428451
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:17141210
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:27473657
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:17912366
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:31839538
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:15657431
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:17696610
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:27760146
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:18070917
Cellular Component	GO:0000795	synaptonemal complex	Sycp3	IDA		Mouse	PMID:23810942
Cellular Component	GO:0000802	transverse filament	Sycp3	IDA		Mouse	PMID:15870106
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Sycp3	IEP		Mouse	PMID:20439489
Biological Process	GO:0051026	chiasma assembly	Sycp3	IDA		Mouse	MGI:MGI:2179610|PMID:12004129
Biological Process	GO:0051026	chiasma assembly	Sycp3	IGI	MGI:MGI:105931	Mouse	PMID:22164254
Biological Process	GO:0016321	female meiosis chromosome segregation	Sycp3	IDA		Mouse	MGI:MGI:2179610|PMID:12004129
Biological Process	GO:0007066	female meiosis sister chromatid cohesion	Sycp3	IDA		Mouse	MGI:MGI:3578071|PMID:15870106
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	Sycp3	IMP	MGI:MGI:2179041	Mouse	PMID:15870106
Biological Process	GO:0051878	lateral element assembly	Sycp3	IGI	MGI:MGI:105931	Mouse	PMID:22164254
Biological Process	GO:0051321	meiotic cell cycle	Sycp3	IDA		Mouse	PMID:12091911
Biological Process	GO:0000711	meiotic DNA repair synthesis	Sycp3	IGI	MGI:MGI:1913904	Mouse	PMID:22164254
Biological Process	GO:0000711	meiotic DNA repair synthesis	Sycp3	IGI	MGI:MGI:105931	Mouse	PMID:22164254
Biological Process	GO:0000278	mitotic cell cycle	Sycp3	IDA		Mouse	PMID:10809667
Biological Process	GO:0035092	sperm DNA condensation	SYCP3	IMP		Human	PMID:14643120
Biological Process	GO:0035092	sperm DNA condensation	Sycp3	IGI	MGI:MGI:105931	Mouse	PMID:22164254
Biological Process	GO:0007283	spermatogenesis	Sycp3	IMP		Mouse	MGI:MGI:1352918|PMID:10678170
Biological Process	GO:0007283	spermatogenesis	Sycp3	IGI	MGI:MGI:105931	Mouse	PMID:22164254
Biological Process	GO:0007130	synaptonemal complex assembly	Sycp3	IDA		Mouse	MGI:MGI:1352918|PMID:10678170
Biological Process	GO:0007130	synaptonemal complex assembly	Sycp3	IGI	MGI:MGI:1913904	Mouse	PMID:22164254

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern