Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNGR1
  • Mouse genes Syngr1
  • Rat genes Syngr1
  • Zfish genes syngr1a,syngr1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Syngr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYNGR1	IPI	UniProtKB:Q969F0	Human	PMID:25416956
Cellular Component	GO:0008021	synaptic vesicle	Syngr1	IDA		Rat	PMID:12928441|RGD:8554439
Cellular Component	GO:0030672	synaptic vesicle membrane	Syngr1	EXP		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0030672	synaptic vesicle membrane	Syngr1	IDA		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0030672	synaptic vesicle membrane	Syngr1	IDA		Rat	PMID:2182650|RGD:155230808
Cellular Component	GO:0030672	synaptic vesicle membrane	Syngr1	IDA		Rat	PMID:8557746|RGD:70030
Cellular Component	GO:0043195	terminal bouton	Syngr1	HDA		Rat	PMID:24876496|RGD:10047219
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Syngr1	IEP		Mouse	PMID:20439489
Biological Process	GO:0006605	protein targeting	Syngr1	IDA		Rat	PMID:12928441|RGD:8554439
Biological Process	GO:0045055	regulated exocytosis	Syngr1	IMP		Rat	PMID:10383386|RGD:13210524
Biological Process	GO:0048169	regulation of long-term neuronal synaptic plasticity	Syngr1	IMP		Mouse	MGI:MGI:1349221|PMID:10595519
Biological Process	GO:0048172	regulation of short-term neuronal synaptic plasticity	Syngr1	IMP		Mouse	MGI:MGI:1349221|PMID:10595519
Biological Process	GO:0048499	synaptic vesicle membrane organization	Syngr1	IMP		Rat	PMID:15590695|RGD:13210551

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern