Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNJ2
  • Mouse genes Synj2
  • Rat genes Synj2
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Synj2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0052659	inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	Synj2	IDA		Rat	PMID:9388224|RGD:69390
Molecular Function	GO:0052658	inositol-1,4,5-trisphosphate 5-phosphatase activity	Synj2	IDA		Rat	PMID:9388224|RGD:69390
Molecular Function	GO:0030165	PDZ domain binding	Synj2	IPI	RGD:69400	Rat	PMID:10357812|RGD:69391
Molecular Function	GO:0052744	phosphatidylinositol monophosphate phosphatase activity	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Molecular Function	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	Synj2	IDA		Mouse	PMID:9442075
Molecular Function	GO:0005515	protein binding	SYNJ2	IPI	UniProtKB:Q96B97	Human	PMID:15090612
Molecular Function	GO:0005515	protein binding	SYNJ2	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	SYNJ2	IPI	UniProtKB:P62993	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	SYNJ2	IPI	UniProtKB:P62993	Human	PMID:20936779
Molecular Function	GO:0005515	protein binding	SYNJ2	IPI	UniProtKB:Q96B97	Human	PMID:31980649
Molecular Function	GO:0005515	protein binding	Synj2	IPI	UniProtKB:Q9WVJ4	Rat	PMID:10357812|RGD:69391
Molecular Function	GO:0005515	protein binding	Synj2	IPI	RGD:732473	Rat	PMID:9388224|RGD:69390
Molecular Function	GO:0017124	SH3 domain binding	Synj2	IPI	RGD:620274	Rat	PMID:11498538|RGD:628465
Cellular Component	GO:0043679	axon terminus	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Cellular Component	GO:0005737	cytoplasm	Synj2	IDA		Rat	PMID:10357812|RGD:69391
Cellular Component	GO:0005737	cytoplasm	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Cellular Component	GO:0005881	cytoplasmic microtubule	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Cellular Component	GO:0005739	mitochondrion	Synj2	IDA		Rat	PMID:10357812|RGD:69391
Cellular Component	GO:0098793	presynapse	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Cellular Component	GO:0032587	ruffle membrane	Synj2	IDA		Rat	PMID:11498538|RGD:628465
Biological Process	GO:0007420	brain development	Synj2	IEP		Rat	PMID:9931483|RGD:2312452
Biological Process	GO:0071545	inositol phosphate catabolic process	Synj2	IDA		Rat	PMID:9388224|RGD:69390
Biological Process	GO:0046856	phosphatidylinositol dephosphorylation	Synj2	IDA		Rat	PMID:11498538|RGD:628465

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern