Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNPO2L
  • Mouse genes Synpo2l
  • Rat genes Synpo2l
  • Zfish genes synpo2la,synpo2lb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Synpo2l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Synpo2l	IPI	PR:Q9JI91	Mouse	PMID:20215401
Cellular Component	GO:0005634	nucleus	Synpo2l	IDA		Mouse	PMID:20215401
Cellular Component	GO:0030018	Z disc	Synpo2l	IDA		Mouse	MGI:MGI:6102963|PMID:29206857
Cellular Component	GO:0030018	Z disc	Synpo2l	IDA		Mouse	PMID:20215401
Biological Process	GO:0048738	cardiac muscle tissue development	synpo2la	IMP	ZFIN:ZDB-MRPHLNO-100427-9	Zfish	PMID:20215401
Biological Process	GO:0048738	cardiac muscle tissue development	synpo2lb	IMP	ZFIN:ZDB-MRPHLNO-100427-8	Zfish	PMID:20215401
Biological Process	GO:0003007	heart morphogenesis	Synpo2l	IMP		Mouse	MGI:MGI:6102963|PMID:29206857
Biological Process	GO:0035025	positive regulation of Rho protein signal transduction	Synpo2l	IMP		Mouse	MGI:MGI:6102963|PMID:29206857
Biological Process	GO:0051496	positive regulation of stress fiber assembly	Synpo2l	IMP		Mouse	MGI:MGI:6102963|PMID:29206857
Biological Process	GO:0045214	sarcomere organization	Synpo2l	IMP		Mouse	MGI:MGI:6102963|PMID:29206857
Biological Process	GO:0007519	skeletal muscle tissue development	synpo2la	IMP	ZFIN:ZDB-MRPHLNO-100427-9	Zfish	PMID:20215401
Biological Process	GO:0007519	skeletal muscle tissue development	synpo2lb	IMP	ZFIN:ZDB-MRPHLNO-100427-8	Zfish	PMID:20215401

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern