Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNPR
  • Mouse genes Synpr
  • Rat genes Synpr
  • Zfish genes synpra,synprb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Synpr

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q969F0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:A5PKU2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:O60883	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:P43005	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q86UP2-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q8IY26	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q8N3T1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q8WVX3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q9NRQ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNPR	IPI	UniProtKB:Q9UPQ8	Human	PMID:32296183
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Synpr	IDA		Rat	PMID:23312519|RGD:155230703
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Synpr	IMP		Rat	PMID:23312519|RGD:155230703
Cellular Component	GO:0030672	synaptic vesicle membrane	Synpr	IDA		Rat	PMID:2206533|RGD:13702286
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Synpr	IDA		Rat	PMID:23312519|RGD:155230703
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Synpr	IMP		Rat	PMID:23312519|RGD:155230703

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern