Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYT9
  • Mouse genes Syt9
  • Rat genes Syt9
  • Zfish genes syt9a,syt9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Syt9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Syt9	IPI	UniProtKB:Q9R0N9	Mouse	MGI:MGI:1858287|PMID:10531343
Molecular Function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	Syt9	IDA		Mouse	MGI:MGI:5780544|PMID:12860971
Molecular Function	GO:0001786	phosphatidylserine binding	Syt9	IDA		Mouse	MGI:MGI:5780544|PMID:12860971
Molecular Function	GO:0005515	protein binding	SYT9	IPI	UniProtKB:O75841	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYT9	IPI	UniProtKB:O95807	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYT9	IPI	UniProtKB:P55061	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Syt9	IPI	UniProtKB:O35681|UniProtKB:Q9R0N4|UniProtKB:Q9R0N8	Mouse	MGI:MGI:1858287|PMID:10531343
Molecular Function	GO:0005515	protein binding	Syt9	IPI	PR:P83741	Mouse	PMID:15350218
Molecular Function	GO:0000149	SNARE binding	Syt9	IDA		Mouse	MGI:MGI:5780544|PMID:12860971
Cellular Component	GO:0031045	dense core granule	Syt9	IDA		Mouse	PMID:16407767
Cellular Component	GO:0031045	dense core granule	Syt9	IDA		Rat	PMID:11751925|RGD:2311146
Cellular Component	GO:0031045	dense core granule	Syt9	IDA		Rat	PMID:21551071|RGD:7205660
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Syt9	IDA		Mouse	PMID:17521570
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Syt9	IMP		Mouse	PMID:17521570
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Syt9	IEP		Mouse	PMID:17521570
Cellular Component	GO:0030141	secretory granule	Syt9	IDA		Rat	PMID:15015935|RGD:7241274
Cellular Component	GO:0030667	secretory granule membrane	Syt9	IDA		Rat	PMID:16165130|RGD:2311147
Cellular Component	GO:0030672	synaptic vesicle membrane	Syt9	IDA		Mouse	PMID:17521570
Cellular Component	GO:0030672	synaptic vesicle membrane	Syt9	IMP		Mouse	PMID:17521570
Cellular Component	GO:0030672	synaptic vesicle membrane	Syt9	IEP		Mouse	PMID:17521570
Biological Process	GO:0099502	calcium-dependent activation of synaptic vesicle fusion	Syt9	IDA		Mouse	PMID:17521570
Biological Process	GO:0099502	calcium-dependent activation of synaptic vesicle fusion	Syt9	IMP		Mouse	PMID:17521570
Biological Process	GO:0045956	positive regulation of calcium ion-dependent exocytosis	Syt9	IDA		Rat	PMID:21551071|RGD:7205660
Biological Process	GO:0017158	regulation of calcium ion-dependent exocytosis	Syt9	IMP		Mouse	MGI:MGI:5780544|PMID:12860971
Biological Process	GO:0017158	regulation of calcium ion-dependent exocytosis	Syt9	IMP		Rat	PMID:11751925|RGD:2311146
Biological Process	GO:0017158	regulation of calcium ion-dependent exocytosis	Syt9	IMP		Rat	PMID:15015935|RGD:7241274
Biological Process	GO:0017158	regulation of calcium ion-dependent exocytosis	Syt9	IMP		Rat	PMID:17686463|RGD:7205657
Biological Process	GO:0050796	regulation of insulin secretion	Syt9	IMP		Rat	PMID:16165130|RGD:2311147

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern