Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF12
  • Mouse genes Taf12
  • Rat genes Taf12
  • Zfish genes taf12
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf12

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	TAF12	IDA		Human	PMID:15601843
Molecular Function	GO:0003677	DNA binding	Taf12	IDA		Mouse	PMID:18722179
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF12	IDA		Human	PMID:17264123
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF12	IPI	UniProtKB:P17544	Human	PMID:17264123
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:Q5VWG9	Human	PMID:11438666
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P20226	Human	PMID:17158164
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P20226	Human	PMID:17268553
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:Q15572	Human	PMID:17268553
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:Q6DHZ2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P31323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P49848-1	Human	PMID:7667268
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P20226	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:Q12962	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:Q15544	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF12	IPI	UniProtKB:P20226	Human	PMID:9603525
Molecular Function	GO:0005515	protein binding	Taf12	IPI	PR:Q9JHD2	Mouse	PMID:16481476
Molecular Function	GO:0005515	protein binding	Taf12	IPI	PR:P07903	Mouse	PMID:22323595
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	TAF12	IDA		Human	PMID:9603525
Molecular Function	GO:0003713	transcription coactivator activity	TAF12	IDA		Human	PMID:11564863
Molecular Function	GO:0003713	transcription coactivator activity	TAF12	IDA		Human	PMID:17264123
Cellular Component	GO:0005634	nucleus	TAF12	IDA		Human	PMID:11564863
Cellular Component	GO:0005634	nucleus	TAF12	EXP		Human	PMID:23332750
Cellular Component	GO:0005634	nucleus	Taf12	IDA		Mouse	PMID:18722179
Cellular Component	GO:0005634	nucleus	Taf12	IDA		Mouse	PMID:22323595
Cellular Component	GO:0005634	nucleus	Taf12	IPI	PR:P07903	Mouse	PMID:22323595
Cellular Component	GO:0000124	SAGA complex	TAF12	IDA		Human	PMID:11564863
Cellular Component	GO:0000124	SAGA complex	Taf12	IDA		Mouse	PMID:19103755
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF12	IPI		Human	PMID:23332750
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF12	IDA		Human	PMID:14580349
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF12	IDA		Human	PMID:29111974
Cellular Component	GO:0033276	transcription factor TFTC complex	TAF12	IDA		Human	PMID:9603525
Biological Process	GO:0006352	DNA-templated transcription initiation	TAF12	IDA		Human	PMID:9603525
Biological Process	GO:0043966	histone H3 acetylation	TAF12	IDA		Human	PMID:10373431
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	TAF12	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	TAF12	IDA		Human	PMID:18206972
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	TAF12	IDA		Human	PMID:17884155
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	TAF12	IDA		Human	PMID:15735663
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	TAF12	IDA		Human	PMID:17264123
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	TAF12	IDA		Human	PMID:17884155
Biological Process	GO:0006468	protein phosphorylation	TAF12	IDA		Human	PMID:15053879
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	TAF12	IDA		Human	PMID:9603525
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	TAF12	IPI		Human	PMID:27007846
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	TAF12	IDA		Human	PMID:9603525

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern