Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF15
  • Mouse genes Taf15
  • Rat genes Taf15
  • Zfish genes taf15
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Taf15	IDA		Mouse	PMID:27378374
Molecular Function	GO:0005515	protein binding	TAF15	IPI	UniProtKB:Q92993	Human	PMID:18509338
Molecular Function	GO:0005515	protein binding	TAF15	IPI	UniProtKB:Q99873	Human	PMID:19124016
Molecular Function	GO:0005515	protein binding	TAF15	IPI	UniProtKB:P35637	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	TAF15	IPI	UniProtKB:P35637	Human	PMID:23975937
Molecular Function	GO:0005515	protein binding	TAF15	IPI	UniProtKB:P35637	Human	PMID:27460707
Molecular Function	GO:0003723	RNA binding	TAF15	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TAF15	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	TAF15	IDA		Human	PMID:27378374
Molecular Function	GO:0003723	RNA binding	Taf15	IDA		Mouse	PMID:27378374
Cellular Component	GO:0005737	cytoplasm	TAF15	IDA		Human	PMID:19124016
Cellular Component	GO:0005654	nucleoplasm	TAF15	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TAF15	IDA		Human	PMID:19124016
Biological Process	GO:0010467	gene expression	Taf15	IMP		Mouse	PMID:27378374
Biological Process	GO:0010467	gene expression	Taf15	IGI	MGI:MGI:1353633	Mouse	PMID:27378374
Biological Process	GO:0048255	mRNA stabilization	TAF15	IDA		Human	PMID:27378374
Biological Process	GO:0008380	RNA splicing	Taf15	IMP		Mouse	PMID:27378374

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern