Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF1B
  • Mouse genes Taf1b
  • Rat genes Taf1b
  • Zfish genes taf1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:P20226	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:Q01105	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:P20226	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:P27797	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:P49748	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF1B	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Taf1b	IPI	UniProtKB:P21333	Mouse	MGI:MGI:5009769|PMID:21228480
Molecular Function	GO:0005515	protein binding	Taf1b	IPI	PR:P29037	Mouse	PMID:9050847
Molecular Function	GO:0005515	protein binding	Taf1b	IPI	MGI:MGI:109576	Mouse	PMID:9050847
Molecular Function	GO:0005515	protein binding	Taf1b	IPI	PR:P97357	Mouse	PMID:9050847
Molecular Function	GO:0001164	RNA polymerase I core promoter sequence-specific DNA binding	TAF1B	IDA		Human	PMID:21921198
Molecular Function	GO:0001164	RNA polymerase I core promoter sequence-specific DNA binding	TAF1B	IDA		Human	PMID:21921199
Cellular Component	GO:0005730	nucleolus	TAF1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TAF1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070860	RNA polymerase I core factor complex	TAF1B	IDA		Human	PMID:21921198
Cellular Component	GO:0070860	RNA polymerase I core factor complex	TAF1B	IDA		Human	PMID:21921199
Biological Process	GO:0001188	RNA polymerase I preinitiation complex assembly	TAF1B	IDA		Human	PMID:21921199

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern