Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF7
  • Mouse genes Taf7
  • Rat genes Taf7
  • Zfish genes taf7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF7	IPI	UniProtKB:Q00613	Human	PMID:11005381
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF7	IPI	UniProtKB:P05412	Human	PMID:12676957
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF7	IPI	UniProtKB:P08047	Human	PMID:7824954
Molecular Function	GO:0061628	H3K27me3 modified histone binding	TAF7	IPI	UniProtKB:P21675	Human	PMID:24927529
Molecular Function	GO:0035035	histone acetyltransferase binding	TAF7	IPI	UniProtKB:Q80UV9	Human	PMID:11592977
Molecular Function	GO:0035035	histone acetyltransferase binding	Taf7	IPI	UniProtKB:Q80UV9	Mouse	MGI:MGI:3847877|PMID:11592977
Molecular Function	GO:0046966	nuclear thyroid hormone receptor binding	TAF7	IPI	UniProtKB:P04625	Human	PMID:10409738
Molecular Function	GO:0042809	nuclear vitamin D receptor binding	TAF7	IPI	UniProtKB:P11473	Human	PMID:10409738
Molecular Function	GO:0106140	P-TEFb complex binding	TAF7	IDA		Human	PMID:18391197
Molecular Function	GO:0005515	protein binding	TAF7	IPI	UniProtKB:Q80UV9-1	Human	PMID:16407123
Molecular Function	GO:0005515	protein binding	TAF7	IPI	UniProtKB:P13051-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TAF7	IPI	UniProtKB:Q03403	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TAF7	IPI	UniProtKB:Q6P4D5-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TAF7	IPI	UniProtKB:P21675	Human	PMID:7824954
Molecular Function	GO:0005515	protein binding	Taf7	IPI	PR:P29037	Mouse	PMID:17242199
Molecular Function	GO:0005515	protein binding	Taf7	IPI	PR:P07903	Mouse	PMID:22323595
Molecular Function	GO:0005515	protein binding	Taf7	IPI	PR:P29037	Mouse	PMID:12665565
Molecular Function	GO:0046982	protein heterodimerization activity	TAF7	IPI	UniProtKB:P21675	Human	PMID:25412659
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	TAF7	IDA		Human	PMID:9603525
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	TAF7	IDA		Human	PMID:25412659
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	TAF7	IDA		Human	PMID:7824954
Molecular Function	GO:0001097	TFIIH-class transcription factor complex binding	TAF7	IDA		Human	PMID:18391197
Molecular Function	GO:0000976	transcription cis-regulatory region binding	TAF7	IDA		Human	PMID:18391197
Cellular Component	GO:0005737	cytoplasm	Taf7	IDA		Mouse	PMID:12665565
Cellular Component	GO:0001673	male germ cell nucleus	Taf7	IDA		Mouse	PMID:12665565
Cellular Component	GO:0071339	MLL1 complex	TAF7	IDA		Human	PMID:15960975
Cellular Component	GO:0005634	nucleus	TAF7	EXP		Human	PMID:23332750
Cellular Component	GO:0005634	nucleus	Taf7	IPI	PR:P07903	Mouse	PMID:22323595
Cellular Component	GO:0005634	nucleus	Taf7	IDA		Mouse	PMID:22323595
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IPI		Human	PMID:23332750
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:14580349
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:24927529
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:25412659
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:27007846
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:29111974
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF7	IDA		Human	PMID:7824954
Cellular Component	GO:0005669	transcription factor TFIID complex	Taf7	IDA		Mouse	PMID:28893950
Cellular Component	GO:0005669	transcription factor TFIID complex	Taf7	IDA		Mouse	PMID:10438527
Cellular Component	GO:0033276	transcription factor TFTC complex	TAF7	IDA		Human	PMID:9603525
Cellular Component	GO:0005667	transcription regulator complex	TAF7	IPI	UniProtKB:P21675	Human	PMID:25412659
Biological Process	GO:0006352	DNA-templated transcription initiation	TAF7	IDA		Human	PMID:9603525
Biological Process	GO:0043966	histone H3 acetylation	TAF7	IDA		Human	PMID:10373431
Biological Process	GO:0030520	intracellular estrogen receptor signaling pathway	Taf7	IDA		Mouse	PMID:10438527
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	TAF7	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	TAF7	IDA		Human	PMID:18206972
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	TAF7	IDA		Human	PMID:17884155
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	TAF7	IDA		Human	PMID:11592977
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	TAF7	IDA		Human	PMID:16407123
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	TAF7	IDA		Human	PMID:18391197
Biological Process	GO:0035067	negative regulation of histone acetylation	TAF7	IDA		Human	PMID:11592977
Biological Process	GO:0045344	negative regulation of MHC class I biosynthetic process	TAF7	IDA		Human	PMID:20937824
Biological Process	GO:0045347	negative regulation of MHC class II biosynthetic process	TAF7	IMP		Human	PMID:20937824
Biological Process	GO:0006469	negative regulation of protein kinase activity	TAF7	IDA		Human	PMID:18391197
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	TAF7	IDA		Human	PMID:16407123
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	TAF7	IDA		Human	PMID:12676957
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	TAF7	IDA		Human	PMID:17884155
Biological Process	GO:0006468	protein phosphorylation	TAF7	IDA		Human	PMID:15053879
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	TAF7	IDA		Human	PMID:9603525
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Taf7	IDA		Mouse	PMID:10438527
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	TAF7	IPI		Human	PMID:27007846
Biological Process	GO:0006366	transcription by RNA polymerase II	TAF7	IDA		Human	PMID:11592977
Biological Process	GO:0006366	transcription by RNA polymerase II	TAF7	IDA		Human	PMID:18391197
Biological Process	GO:0006366	transcription by RNA polymerase II	TAF7	IDA		Human	PMID:7824954
Biological Process	GO:0006366	transcription by RNA polymerase II	Taf7	IDA		Mouse	PMID:10438527
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	TAF7	IDA		Human	PMID:16407123
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	TAF7	IDA		Human	PMID:9603525

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern