Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF9
  • Mouse genes Taf9
  • Rat genes Taf9
  • Zfish genes taf9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051117	ATPase binding	TAF9	IPI	UniProtKB:P60122	Human	PMID:17636026
Molecular Function	GO:0051117	ATPase binding	TAF9	IPI	UniProtKB:Q9WTM5	Human	PMID:17636026
Molecular Function	GO:0070742	C2H2 zinc finger domain binding	TAF9	IPI	UniProtKB:P46099	Human	PMID:19251649
Molecular Function	GO:0003677	DNA binding	TAF9	IDA		Human	PMID:15601843
Molecular Function	GO:0003677	DNA binding	Taf9	IDA		Mouse	PMID:18722179
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF9	IPI	UniProtKB:P46099	Human	PMID:19251649
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TAF9	IPI	UniProtKB:P33076	Human	PMID:9171108
Molecular Function	GO:0004402	histone acetyltransferase activity	TAF9	IDA		Human	PMID:9674425
Molecular Function	GO:0002039	p53 binding	TAF9	IPI	UniProtKB:P10361	Human	PMID:11278372
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q04206	Human	PMID:15489227
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P49848	Human	PMID:15601843
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P49848	Human	PMID:15899866
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q15542	Human	PMID:15899866
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q14919	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:O60684	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P52294	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q14919	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9Y6J9	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P22087	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9NWK9	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9Y2X3	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P46099	Human	PMID:19251649
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q14919	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P52294	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q14919	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9Y6J9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:O60684	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q14919	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9Y6J9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:P49848-1	Human	PMID:7667268
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q15542	Human	PMID:9045704
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q92831	Human	PMID:9674425
Molecular Function	GO:0005515	protein binding	TAF9	IPI	UniProtKB:Q9Y6J9	Human	PMID:9674425
Molecular Function	GO:0005515	protein binding	Taf9	IPI	RGD:62004	Rat	PMID:15066269|RGD:9681727
Molecular Function	GO:0000976	transcription cis-regulatory region binding	TAF9	IDA		Human	PMID:19251649
Molecular Function	GO:0003713	transcription coactivator activity	TAF9	IMP		Human	PMID:11278372
Molecular Function	GO:0003713	transcription coactivator activity	TAF9	IDA		Human	PMID:11564863
Cellular Component	GO:0071339	MLL1 complex	TAF9	IDA		Human	PMID:15960975
Cellular Component	GO:0005654	nucleoplasm	TAF9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TAF9	IDA		Human	PMID:11564863
Cellular Component	GO:0005634	nucleus	TAF9	EXP		Human	PMID:23332750
Cellular Component	GO:0005634	nucleus	Taf9	IDA		Mouse	PMID:18722179
Cellular Component	GO:0070761	pre-snoRNP complex	TAF9	IDA		Human	PMID:17636026
Cellular Component	GO:0000124	SAGA complex	TAF9	IDA		Human	PMID:11564863
Cellular Component	GO:0000124	SAGA complex	TAF9	IDA		Human	PMID:9674425
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF9	IPI		Human	PMID:23332750
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF9	IDA		Human	PMID:14580349
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF9	IDA		Human	PMID:15899866
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF9	IDA		Human	PMID:29111974
Cellular Component	GO:0033276	transcription factor TFTC complex	TAF9	IDA		Human	PMID:15899866
Biological Process	GO:0000492	box C/D snoRNP assembly	TAF9	IDA		Human	PMID:17636026
Biological Process	GO:0043966	histone H3 acetylation	TAF9	IDA		Human	PMID:10373431
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	TAF9	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	TAF9	IDA		Human	PMID:18206972
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	TAF9	IDA		Human	PMID:17884155
Biological Process	GO:0043066	negative regulation of apoptotic process	TAF9	IMP		Human	PMID:15899866
Biological Process	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	TAF9	IDA		Human	PMID:11278372
Biological Process	GO:0060760	positive regulation of response to cytokine stimulus	TAF9	IMP		Human	PMID:15489227
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	TAF9	IDA		Human	PMID:11278372
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Taf9	IMP		Mouse	MGI:MGI:3850307|PMID:19251649
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Taf9	IMP		Rat	PMID:15066269|RGD:9681727
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	TAF9	IDA		Human	PMID:17884155
Biological Process	GO:0006468	protein phosphorylation	TAF9	IDA		Human	PMID:15053879
Biological Process	GO:0050821	protein stabilization	TAF9	IDA		Human	PMID:15899866
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	TAF9	IDA		Human	PMID:9603525
Biological Process	GO:0070555	response to interleukin-1	TAF9	IMP		Human	PMID:15489227
Biological Process	GO:1902065	response to L-glutamate	Taf9	IEP		Rat	PMID:15066269|RGD:9681727
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	TAF9	IPI		Human	PMID:27007846

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern