Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAMALIN
  • Mouse genes Tamalin
  • Rat genes Tamalin
  • Zfish genes tamalin
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tamalin

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Tamalin	IPI	UniProtKB:Q8R4T5	Rat	PMID:12586822|RGD:1299234
Molecular Function	GO:0042802	identical protein binding	Tamalin	IPI	UniProtKB:Q8R4T5	Rat	PMID:17396155|RGD:8553557
Molecular Function	GO:0030165	PDZ domain binding	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	PR:O08967	Mouse	PMID:10828067
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:O35431	Rat	PMID:12586822|RGD:1299234
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:O88382	Rat	PMID:12586822|RGD:1299234
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:P31016	Rat	PMID:12586822|RGD:1299234
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:P97838	Rat	PMID:12586822|RGD:1299234
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:O88382	Rat	PMID:17396155|RGD:8553557
Molecular Function	GO:0005515	protein binding	Tamalin	IPI	UniProtKB:P31424	Rat	PMID:17396155|RGD:8553557
Molecular Function	GO:0031267	small GTPase binding	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0098978	glutamatergic synapse	Tamalin	IMP		Mouse	PMID:28285821
Cellular Component	GO:0098978	glutamatergic synapse	Tamalin	IDA		Mouse	PMID:28285821
Cellular Component	GO:0098978	glutamatergic synapse	Tamalin	IEP		Mouse	PMID:28285821
Cellular Component	GO:0098978	glutamatergic synapse	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0098978	glutamatergic synapse	Tamalin	IMP		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0005886	plasma membrane	Tamalin	IDA		Mouse	PMID:10828067
Cellular Component	GO:0005886	plasma membrane	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0014069	postsynaptic density	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0014069	postsynaptic density	Tamalin	IMP		Rat	PMID:11850456|RGD:70394
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Tamalin	IMP		Mouse	PMID:28285821
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Tamalin	IDA		Mouse	PMID:28285821
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Tamalin	IEP		Mouse	PMID:28285821
Biological Process	GO:0008104	protein localization	Tamalin	IDA		Rat	PMID:11850456|RGD:70394
Biological Process	GO:0099152	regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane	Tamalin	IDA		Mouse	PMID:28285821
Biological Process	GO:0099152	regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane	Tamalin	IMP		Mouse	PMID:28285821
Biological Process	GO:0099152	regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane	Tamalin	IEP		Mouse	PMID:28285821
Biological Process	GO:0007165	signal transduction	Tamalin	IPI	PR:O08967	Mouse	PMID:10828067

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern