Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAPBP
  • Mouse genes Tapbp
  • Rat genes Tapbp
  • Zfish genes tapbp.1,tapbp.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tapbp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0060090	molecular adaptor activity	TAPBP	IDA		Human	PMID:17947644
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03518	Human	PMID:12213826
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03519	Human	PMID:12213826
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q77CE4	Human	PMID:15793001
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03518	Human	PMID:17055437
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03518	Human	PMID:18802093
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q77CE4	Human	PMID:18802093
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:P0C739	Human	PMID:19201886
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03518	Human	PMID:19201886
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:Q03519	Human	PMID:19201886
Molecular Function	GO:0005515	protein binding	TAPBP	IPI	UniProtKB:P0C739	Human	PMID:22810586
Molecular Function	GO:0005515	protein binding	Tapbp	IPI	PR:Q61335	Mouse	PMID:15187134
Molecular Function	GO:0062061	TAP complex binding	TAPBP	IDA		Human	PMID:17947644
Molecular Function	GO:0046978	TAP1 binding	TAPBP	IPI	UniProtKB:P36370	Human	PMID:12047747
Molecular Function	GO:0046978	TAP1 binding	TAPBP	IDA		Human	PMID:22638925
Molecular Function	GO:0046979	TAP2 binding	TAPBP	IPI	UniProtKB:P36372	Human	PMID:12047747
Molecular Function	GO:0046979	TAP2 binding	TAPBP	IDA		Human	PMID:22638925
Cellular Component	GO:0005789	endoplasmic reticulum membrane	TAPBP	IDA		Human	PMID:11884415
Cellular Component	GO:0000139	Golgi membrane	TAPBP	IDA		Human	PMID:11884415
Cellular Component	GO:0042824	MHC class I peptide loading complex	TAPBP	IDA		Human	PMID:17947644
Cellular Component	GO:0042824	MHC class I peptide loading complex	TAPBP	IDA		Human	PMID:21263072
Cellular Component	GO:0042824	MHC class I peptide loading complex	Tapbp	IDA		Rat	PMID:11294569|RGD:634074
Cellular Component	GO:0061779	Tapasin-ERp57 complex	TAPBP	IPI		Human	PMID:19119025
Biological Process	GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	Tapbp	IDA		Mouse	PMID:9716645
Biological Process	GO:0006952	defense response	Tapbp	IMP	MGI:MGI:1888941	Mouse	PMID:10981964
Biological Process	GO:0002397	MHC class I protein complex assembly	Tapbp	IEP		Rat	PMID:12407112|RGD:633939
Biological Process	GO:0002398	MHC class Ib protein complex assembly	TAPBP	IMP		Human	PMID:12582157
Biological Process	GO:0002502	peptide antigen assembly with MHC class I protein complex	TAPBP	IDA		Human	PMID:10636848
Biological Process	GO:0002502	peptide antigen assembly with MHC class I protein complex	TAPBP	IDA		Human	PMID:17603487
Biological Process	GO:0050823	peptide antigen stabilization	Tapbp	IMP		Mouse	MGI:MGI:3687922|PMID:12594855
Biological Process	GO:0065003	protein-containing complex assembly	TAPBP	IDA		Human	PMID:17947644
Biological Process	GO:0010468	regulation of gene expression	TAPBP	IMP		Human	PMID:18802093
Biological Process	GO:0061635	regulation of protein complex stability	TAPBP	IDA		Human	PMID:18802093

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern