Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAT
  • Mouse genes Tat
  • Rat genes Tat
  • Zfish genes tat
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tat

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016597	amino acid binding	Tat	IDA		Rat	PMID:12717026|RGD:1582407
Molecular Function	GO:0042802	identical protein binding	TAT	IPI	UniProtKB:P17735	Human	PMID:25502805
Molecular Function	GO:0042802	identical protein binding	TAT	IPI	UniProtKB:P17735	Human	PMID:31515488
Molecular Function	GO:0042802	identical protein binding	TAT	IPI	UniProtKB:P17735	Human	PMID:32296183
Molecular Function	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	TAT	IDA		Human	PMID:7999802
Molecular Function	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	Tat	IDA		Mouse	MGI:MGI:5430853|PMID:21153519
Molecular Function	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	Tat	IDA		Rat	PMID:12717026|RGD:1582407
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:Q05086-3	Human	PMID:24722188
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:P15104	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:Q05086	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:Q05086-3	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:Q05086	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:Q05086-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:P28799	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TAT	IPI	UniProtKB:P28799-2	Human	PMID:32814053
Cellular Component	GO:0005739	mitochondrion	Tat	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Tat	IDA		Rat	PMID:4390541|RGD:1600132
Biological Process	GO:0006103	2-oxoglutarate metabolic process	TAT	IDA		Human	PMID:7999802
Biological Process	GO:0006103	2-oxoglutarate metabolic process	Tat	IDA		Mouse	MGI:MGI:5430853|PMID:21153519
Biological Process	GO:0006520	amino acid metabolic process	Tat	IDA		Rat	PMID:12717026|RGD:1582407
Biological Process	GO:0006536	glutamate metabolic process	TAT	IDA		Human	PMID:7999802
Biological Process	GO:0006536	glutamate metabolic process	Tat	IDA		Mouse	MGI:MGI:5430853|PMID:21153519
Biological Process	GO:0071548	response to dexamethasone	Tat	IEP		Rat	PMID:27856527|RGD:127285625
Biological Process	GO:0051384	response to glucocorticoid	Tat	IDA		Rat	PMID:16307467|RGD:1600129
Biological Process	GO:0046689	response to mercury ion	Tat	IDA		Rat	PMID:16307467|RGD:1600129
Biological Process	GO:0014070	response to organic cyclic compound	Tat	IDA		Rat	PMID:15755314|RGD:1600130
Biological Process	GO:0006979	response to oxidative stress	Tat	IDA		Rat	PMID:16335249|RGD:1600127
Biological Process	GO:0006572	tyrosine catabolic process	TAT	IDA		Human	PMID:7999802
Biological Process	GO:0006572	tyrosine catabolic process	Tat	IDA		Mouse	MGI:MGI:5430853|PMID:21153519

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern