Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TBC1D17
  • Mouse genes Tbc1d17
  • Rat genes Tbc1d17
  • Zfish genes tbc1d17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tbc1d17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TBC1D17	IPI	UniProtKB:Q96CV9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TBC1D17	IPI	UniProtKB:Q9H0R8	Human	PMID:22354992
Molecular Function	GO:0005515	protein binding	TBC1D17	IPI	UniProtKB:Q9H492	Human	PMID:22354992
Molecular Function	GO:0005515	protein binding	TBC1D17	IPI	UniProtKB:Q96CV9	Human	PMID:22854040
Cellular Component	GO:0005829	cytosol	TBC1D17	IDA		Human	PMID:17562788
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	TBC1D17	IMP		Human	PMID:17562788

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern