Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TBC1D23
  • Mouse genes Tbc1d23
  • Rat genes Tbc1d23
  • Zfish genes tbc1d23
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tbc1d23

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:O43379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:P60411	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q8TC20	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q9BQ66	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q9BWW4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q13439	Human	PMID:29084197
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q658Y4	Human	PMID:29084197
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q92805	Human	PMID:29084197
Molecular Function	GO:0005515	protein binding	TBC1D23	IPI	UniProtKB:Q7L5A3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tbc1d23	IPI	UniProtKB:Q13439|UniProtKB:Q5T1M5|UniProtKB:Q641Q2|UniProtKB:Q658Y4|UniProtKB:Q92805|UniProtKB:Q9BZH6|UniProtKB:Q9HAS0	Mouse	MGI:MGI:5920698|PMID:29084197
Cellular Component	GO:0031410	cytoplasmic vesicle	TBC1D23	IDA		Human	PMID:29426865
Cellular Component	GO:0005794	Golgi apparatus	TBC1D23	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005802	trans-Golgi network	TBC1D23	IDA		Human	PMID:28823706
Cellular Component	GO:0005802	trans-Golgi network	TBC1D23	IDA		Human	PMID:29084197
Cellular Component	GO:0005802	trans-Golgi network	TBC1D23	IDA		Human	PMID:29426865
Cellular Component	GO:0071203	WASH complex	Tbc1d23	IDA		Mouse	MGI:MGI:5920698|PMID:29084197
Biological Process	GO:0007420	brain development	TBC1D23	IMP		Human	PMID:28823706
Biological Process	GO:0007420	brain development	TBC1D23	IMP		Human	PMID:28823707
Biological Process	GO:0007420	brain development	tbc1d23	IMP	ZFIN:ZDB-MRPHLNO-171027-3	Zfish	PMID:28823706
Biological Process	GO:0007420	brain development	tbc1d23	IMP	ZFIN:ZDB-MRPHLNO-171027-2	Zfish	PMID:28823706
Biological Process	GO:1990403	embryonic brain development	Tbc1d23	IMP		Mouse	MGI:MGI:6094290|PMID:28823707
Biological Process	GO:1990403	embryonic brain development	tbc1d23	IMP		Zfish	PMID:28823706|ZFIN:ZDB-PUB-170822-8
Biological Process	GO:0031175	neuron projection development	Tbc1d23	IMP		Mouse	MGI:MGI:6094290|PMID:28823707
Biological Process	GO:0032755	positive regulation of interleukin-6 production	Tbc1d23	IMP	MGI:MGI:3857844	Mouse	PMID:22312129
Biological Process	GO:0050727	regulation of inflammatory response	Tbc1d23	IMP	MGI:MGI:3857844	Mouse	PMID:22312129
Biological Process	GO:0032680	regulation of tumor necrosis factor production	Tbc1d23	IMP	MGI:MGI:3857844	Mouse	PMID:22312129
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	TBC1D23	IMP		Human	PMID:29084197
Biological Process	GO:0099041	vesicle tethering to Golgi	TBC1D23	IDA		Human	PMID:29426865
Biological Process	GO:0016192	vesicle-mediated transport	Tbc1d23	IMP		Mouse	MGI:MGI:6094290|PMID:28823707

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern