Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TBRG4
  • Mouse genes Tbrg4
  • Rat genes Tbrg4
  • Zfish genes tbrg4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tbrg4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q13137	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q969L2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:B7ZLI8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:O15126	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q04118	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q7Z5P4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q86VR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q86X02	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8IZR5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8TD16-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8WV19	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8WW34-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q8WZ55	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q96D09	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q96DZ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q9H400	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q9NRY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBRG4	IPI	UniProtKB:Q9UBN6	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	TBRG4	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TBRG4	HDA		Human	PMID:22681889
Cellular Component	GO:0005759	mitochondrial matrix	TBRG4	IDA		Human	PMID:28335001
Cellular Component	GO:0005739	mitochondrion	TBRG4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	TBRG4	IDA		Human	PMID:20869947
Cellular Component	GO:0005739	mitochondrion	Tbrg4	HDA		Mouse	PMID:18614015
Biological Process	GO:0090615	mitochondrial mRNA processing	TBRG4	IMP		Human	PMID:28335001
Biological Process	GO:0016071	mRNA metabolic process	TBRG4	IMP		Human	PMID:28335001
Biological Process	GO:0044528	regulation of mitochondrial mRNA stability	TBRG4	IMP		Human	PMID:28335001

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern